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Marker Overview
| Name | NAU2761 |
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| Genbank ID | CO078485 |
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| Type | SSR |
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| Species | Gossypium raimondii |
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| Source Type | EST |
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| Repeat Motif | (ttaa)6 |
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| PCR Condition | Annealing temperature: 57 |
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| Primer 1 | NAU2761_F: GACAAGTTTTTGGACCCACT |
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| Primer 2 | NAU2761_R: TTCATAGAGGGGTTTTGCAT |
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| Restriction Enzyme | NotI; EcoRV |
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| Publication | [view all] |
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| Contact | Zhang, Tian-Zhen
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| Comment | Primer data obtained in 2007-05 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch17_Dt.03 | N/A | 15.1 | NAU2761 | View |
| 2 | AD-genome wide Reference Map (2009) | AD_ch17_Dt.03 | N/A | 142 | NAU2761 | View |
| 3 | Yumian-1 x T586, RIL (2006) | AD_ch02_At.02 | N/A | 27.5 | NAU2761 | View |
| 4 | Yumian-1 x T586, RIL (2015) | AD_ch02_At.02 | N/A | 90.4 | NAU2761 | View |
| 5 | Yumian-1 x 7235, RIL (2015) | AD_ch02_At.02 | N/A | 71.4 | NAU2761 | View |
| 6 | Emian-22 x 3-79, BC1 (2011) | AD_ch02_At.02 | N/A | 95.83 | NAU2761a | View |
| 7 | Emian-22 x 3-79, BC1 (2011) | AD_ch17_Dt.03 | N/A | 73.86 | NAU2761b | View |
| 8 | Emian-22 x 3-79, BC1 (2015) | AD_ch17_Dt.03 | N/A | 100.9 | NAU2761b | View |
| 9 | TM-1 x Hai-7124, BC1 (2007) | AD_ch17_Dt.03 | N/A | 54.8 | NAU2761-280 | View |
| 10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch17_Dt.03 | N/A | 43.73 | NAU2761-280 | View |
| 11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch17_Dt.03 | N/A | 54.4 | NAU2761-280 | View |
| 12 | Yumian-1 x T586, RIL (2009) | AD_ch02_At.02 | N/A | 65.7 | NAU2761/400t(C17) | View |
| 13 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch17_Dt.03 | N/A | 15.1 | NAU2761 | View |
Sequence
>NAU2761 ID=NAU2761; Name=NAU2761; organism=Gossypium raimondii; type=genetic_marker; length=237bp
GACAAGTTTTTGGACCCACTAATTTAATAATAATAATAATAATGTACTCC
CCCCAAAAATCTTTAATTAATTAATTAATTAATTAATTTTTCTTCCCCTC
TTCACCGCCTTCTTCCAAGTAAGCCTTCTTTCTCCTATCAACACCCGCAA
ACAAACAAATCACAAGGAAAAACGTGGCGTACATCCCATGGACCTTCCAA
TTAGTCTTCCGCGGTTGATGCAAAACCCCTCTATGAA
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