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Marker Overview
Name | NAU2083 |
Genbank ID | DR044172 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | 7235 7235
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Source Sequence | DR044172.1
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Source Type | EST |
Repeat Motif | GAC(9) |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2083_F: AGAAGAGGTTGACGGTGAAG |
Primer 2 | NAU2083_R: TGAGTGAAGAACCTGCACAT |
Product Length | 168 |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
7235 | accession |
7235 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch01_At.01 | N/A | 113.98 | NAU2083 | View |
2 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch01_At.01 | N/A | 97.91 | NAU2083 | View |
3 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 181 | NAU2083 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch01_At.01 | N/A | 0 | NAU2083 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch01_At.01 | N/A | 15 | NAU2083 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch01_At.01 | N/A | 10.9 | NAU2083 | View |
7 | Prema x 86-1, RIL (2015) | AD_ch01_At.01 | N/A | 0 | NAU2083 | View |
8 | TM-1 x 3-79, RIL (2014) | AD_ch01_At.01 | N/A | 144.4 | NAU2083 | View |
9 | W10 x TM-1, F2:3 (2015) | AD_ch08_At.08 | N/A | 96.3 | NAU2083 | View |
10 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.01 | N/A | 111.5 | NAU2083 | View |
11 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch01_At.01 | N/A | 136 | NAU2083 | View |
12 | CCRI-36 x G2005, RIL (2016) | AD_ch15_Dt.01 | N/A | 2.6 | NAU2083 | View |
13 | TM-1 x Hai-7124, BC1 (2007) | AD_ch01_At.01 | N/A | 26.4 | NAU2083-300 | View |
14 | TM-1 x Hai-7124, BC1 (2008) | AD_ch01_At.01 | N/A | 29.74 | NAU2083-300 | View |
15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch01_At.01 | N/A | 104.8 | NAU2083-300 | View |
16 | Yumian-1 x T586, RIL (2009) | AD_ch01_At.01 | N/A | 9.9 | NAU2083/150y(C1) | View |
17 | TM-1 x 3-79, RIL (2012.v3) | AD_ch01_At.01 | N/A | 144.38 | NAU2083 | View |
Sequence
>NAU2083 ID=NAU2083; Name=NAU2083; organism=Gossypium hirsutum; type=genetic_marker; length=168bp AGAAGAGGTTGACGGTGAAGATGAAAGTGAAGTAGAAGGTGGCGAACCGG AAGAGGAAGACGACGATGACGACGACGAGGATGAGGATGATGAAGGCGAA GATGACGACGACGACGACGACGACGACGACAAGGAGAGGAGGATGACGAT GTGCAGGTTCTTCACTCA
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