NAU1336, NAU1336 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1336
Genbank IDBF275766
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(CTT)8
PCR ConditionAnnealing temperature: 57
Primer 1NAU1336_F: TCGCTAATTCTACCTCCTTATT
Primer 2NAU1336_R: GCGGGTAATTGTAGTACATGC
Product Length166
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBF275766
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
17235 x TM-1, RIL (2007)AD_ch24_Dt.08N/A33.5NAU1336View
2AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A167NAU1336View
3AD-genome wide Reference Map (2009)AD_ch08_At.08N/A102NAU1336View
47235 x TM-1, F2:3 (2005)AD_ch24_Dt.08N/A8.1NAU1336View
5Yumian-1 x 7235, RIL (2015)AD_ch24_Dt.08N/A44NAU1336View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch08_At.08N/A44.3NAU1336View
7TM-1 x Hai-7124, BC1 (2007)AD_ch08_At.08N/A63NAU1336-160View
8TM-1 x Hai-7124, BC1 (2008)AD_ch08_At.08N/A65.02NAU1336-160View
9TM-1 x Hai-7124, BC1 (2012)AD_ch08_At.08N/A68.5NAU1336-160View
10TM-1 x 3-79, RIL (2011)AD_ch08_At.08N/A4.3NAU1336_163/159View
Sequence
>NAU1336 ID=NAU1336; Name=NAU1336; organism=Gossypium arboreum; type=genetic_marker; length=166bp
TCGCTAATTCTACCTCCTTATTATCTCCTTCTTCTTCTTCTTCTTCTTCT
TCATCTTTAGAAAATCCCTTCTTTCCCAAATAATTTTTTTTTCAGGAATT
AACCTTTGAGATTTTGAATAATGTATCCGCCGCCAGGGCCAGGAGGCATG
TACTACAATTACCCGC