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Marker Overview
Name | NAU1246 |
Genbank ID | BF274421 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TCTTT)5 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1246_F: TGCGCACTAAAGAAAAAGAA |
Primer 2 | NAU1246_R: GAACAAAATGAATACCCCACA |
Product Length | 191 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Image
File Name | Legend |
45_FISH_GEN-178-1117_fig2.jpg | BAC clones and their corresponding genetic markers of the 22 probes according to FISH signal patterns in Figure 1. [Image from Wang et al., 2008, GEN-178-1117] |
46_FISH_GEN-178-1117_fig3.jpg | Two BAC translocations involving two chromosome pairs of At2 and A3 and At4 and A5 between G. arboreum and A-subgenome of G. hirsutum. [Image from Wang et al., 2008, GEN-178-1117] |
Sequence
>NAU1246 ID=NAU1246; Name=NAU1246; organism=Gossypium arboreum; type=genetic_marker; length=191bp TGCGCACTAAAGAAAAAGAAGATAAATGATATCTCCTATATAGCATATAA TATTGTTTTGGATTAAAAAGGTTTGATTTTTTACATATATGTCCATGTTT GTATAGCAGTGAAAATCAAGAGTATTTGACTGAAGTGAAAAATTCTCTTT TCTTTTCTTTTCTTTTCTTTTGTGGGGTATTCATTTTGTTC
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