NAU1230, NAU1230 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1230
Genbank IDBG440224
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(TCAAGC)5
PCR ConditionAnnealing temperature: 57
Primer 1NAU1230_F: CATGCAAATCCATGCTAGAG
Primer 2NAU1230_R: TCAAAAGGTTCTTTGGTGGT
Product Length247
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBG440224
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch05_At.05N/A4.5NAU1230View
2Zhongmiansuo-12 x 8891, RIL (2007)AD_ch19_Dt.05N/A0.2NAU1230View
3Yumian-1 x T586, RIL (2006)AD_ch05_At.05N/A11.8NAU1230View
4(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch05_At.05N/A72.1NAU1230View
5PD6992 x SM3, F2:3 (2005)AD_ch19_Dt.05N/A0.8NAU1230View
660182 x Jun Mian 1, F2:3 (2007)AD_ch23_Dt.09N/A5.1NAU1230View
7Yumian-1 x T586, RIL (2015)AD_ch05_At.05N/A52.9NAU1230View
8Baimian 1 x TM-1 , F2:3 (2014)AD_ch19_Dt.05N/A42.7NAU1230View
9Yumian-1 x 7235, RIL (2015)AD_ch05_At.05N/A14NAU1230View
10TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch19_Dt.05N/A21.8NAU1230View
110-153 x sGK9708, RIL (2016)AD_ch19_Dt.05N/A16.7NAU1230View
12CCRI-35 x Yumian-1, RIL (2015)AD_ch05_At.05N/A59.6NAU1230View
13901-001 x sGK156, F2 (2019)AD_ch19_Dt.05N/A16.62NAU1230View
14Yumian-1 x T586, RIL (2009)AD_ch05_At.05N/A11.8NAU1230/210yView
15CCRI-35 x Yumian-1, RIL (2017)AD_ch05_At.05N/A99.12NAU1230View
Sequence
>NAU1230 ID=NAU1230; Name=NAU1230; organism=Gossypium arboreum; type=genetic_marker; length=247bp
CATGCAAATCCATGCTAGAGAGTACTTCAGCAAATTCCCAAGAGTTAACA
CCAATGAGAAAGAGACNNACACCAGAGAGCANAAGCACGAGACCTTCGTT
CCCCAGAACACCCCAAAGCCAGAAGAAACAGAGCCAAGGGTCATCCCTGG
AAACCCAAATGGGGTATGGGCTTTANGGGCACGAATCAAGCTCAAGCTCA
AGCTCAAGCTCAAGCCGGNCCAGTTTTACCACCAAAGAACCTTTTGA