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Marker Overview
Name | NAU1225 |
Genbank ID | BG440640 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (GCTCAT)3 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1225_F: CAGCAAATTCGCAAGAGTTA |
Primer 2 | NAU1225_R: CTAACAGGGGTGACATAGGG |
Product Length | 241 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch05_At.05 | N/A | 0.6 | NAU1225 | View |
2 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch19_Dt.05 | N/A | 0.2 | NAU1225 | View |
3 | Yumian-1 x T586, RIL (2006) | AD_ch05_At.05 | N/A | 0 | NAU1225 | View |
4 | 60182 x Jun Mian 1, F2:3 (2007) | AD_ch23_Dt.09 | N/A | 0 | NAU1225 | View |
5 | Yumian-1 x T586, RIL (2015) | AD_ch05_At.05 | N/A | 49.4 | NAU1225 | View |
6 | PD6992 x SM3, F2:3 (2005) | AD_ch19_Dt.05 | N/A | 0.8 | NAU1225 | View |
7 | Yumian-1 x 7235, RIL (2015) | AD_ch05_At.05 | N/A | 11.3 | NAU1225 | View |
8 | 0-153 x sGK9708, RIL (2016) | AD_ch19_Dt.05 | N/A | 17.4 | NAU1225 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch05_At.05 | N/A | 90.8 | NAU1225 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch19_Dt.05 | N/A | 124.9 | NAU1225 | View |
11 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch05_At.05 | N/A | 57.6 | NAU1225 | View |
12 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A13 | N/A | 8.5 | NAU1225-b | View |
13 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A13 | N/A | 59.8 | NAU1225-a | View |
14 | Yumian-1 x T586, RIL (2009) | AD_ch05_At.05 | N/A | 0 | NAU1225/250y | View |
15 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch05_At.05 | N/A | 99.4 | NAU1225 | View |
Sequence
>NAU1225 ID=NAU1225; Name=NAU1225; organism=Gossypium arboreum; type=genetic_marker; length=241bp CAGCAAATTCGCAAGAGTTAACACCATTGATATAGAGACAACTTCCAGAG AGCAAAAGCACGAGACCTTCGTTCCCCAGACCACCCAAAAGCCACATGAA CAAGAGCCAAGGTTCATGCCTGAAACCCAAAATGGTTATGGCCTTGTCGG CCACGAGTCAGGCTCATGCTCATGCTCATGCTCATGCCGGCCCAGCTTCA CGCACCGAAGAGACCTATGAACCCTATGTCACCCCTGTTAG
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