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Marker Overview
Name | NAU1221 |
Genbank ID | BG440896 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TCAAGC)5 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1221_F: CATGCAAATCCATGCTAGAG |
Primer 2 | NAU1221_R: AGGTTTCTTTGGTGGTGAAA |
Product Length | 242 |
Restriction Enzyme | EcoRI; XhoI |
Polymorphism | P_ NAU1221 |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch19_Dt.05 | N/A | 128 | NAU1221 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 157 | NAU1221 | View |
3 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch19_Dt.05 | N/A | 0 | NAU1221 | View |
4 | Yumian-1 x T586, RIL (2006) | AD_ch05_At.05 | N/A | 5.5 | NAU1221 | View |
5 | PD6992 x SM3, F2:3 (2005) | AD_ch19_Dt.05 | N/A | 0.9 | NAU1221 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch05_At.05 | N/A | 56.1 | NAU1221 | View |
7 | Baimian 1 x TM-1 , F2:3 (2014) | AD_ch19_Dt.05 | N/A | 34.2 | NAU1221 | View |
8 | Yumian-1 x 7235, RIL (2015) | AD_ch05_At.05 | N/A | 15 | NAU1221 | View |
9 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch19_Dt.05 | N/A | 17.9 | NAU1221 | View |
10 | 0-153 x sGK9708, RIL (2016) | AD_ch19_Dt.05 | N/A | 15.2 | NAU1221 | View |
11 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.05 | N/A | 102.5 | NAU1221 | View |
12 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch05_At.05 | N/A | 85.9 | NAU1221 | View |
13 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch05_At.05 | N/A | 54.3 | NAU1221 | View |
14 | TM-1 x 3-79, RIL (2012) | AD_ch05_At.05 | N/A | 52.04 | NAU1221a | View |
15 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch05_At.05 | N/A | 70.2 | NAU1221a | View |
16 | TM-1 x 3-79, RIL (2014) | AD_ch05_At.05 | N/A | 148.7 | NAU1221a | View |
17 | GX1135 x GX100-2, F2 (2013) | AD_ch19_Dt.05 | N/A | 45.7 | NAU1221a | View |
18 | 901-001 x sGK156, F2 (2019) | AD_ch19_Dt.05 | N/A | 12.73 | NAU1221a | View |
19 | TM-1 x 3-79, RIL (2012) | AD_ch05_At.05 | N/A | 58.27 | NAU1221c | View |
20 | TM-1 x 3-79, RIL (2014) | AD_ch05_At.05 | N/A | 138.2 | NAU1221c | View |
21 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 62.86 | NAU1221b | View |
22 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch21_Dt.11 | N/A | 127.3 | NAU1221b | View |
23 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 121 | NAU1221b | View |
24 | GX1135 x GX100-2, F2 (2013) | AD_ch19_Dt.05 | N/A | 43.1 | NAU1221b | View |
25 | 901-001 x sGK156, F2 (2019) | AD_ch19_Dt.05 | N/A | 20.5 | NAU1221b | View |
26 | TM-1 x Hai-7124, BC1 (2007) | AD_ch19_Dt.05 | N/A | 69.9 | NAU1221-310 | View |
27 | TM-1 x Hai-7124, BC1 (2008) | AD_ch19_Dt.05 | N/A | 69.64 | NAU1221-310 | View |
28 | TM-1 x Hai-7124, BC1 (2012) | AD_ch19_Dt.05 | N/A | 121.8 | NAU1221-310 | View |
29 | Yumian-1 x T586, RIL (2009) | AD_ch05_At.05 | N/A | 5.5 | NAU1221/220y(C19) | View |
30 | TM-1 x 3-79, RIL (2011) | AD_ch19_Dt.05 | N/A | 26.9 | NAU1221_232/238 | View |
31 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch05_At.05 | N/A | 98.83 | NAU1221 | View |
32 | TM-1 x 3-79, RIL (2012.v3) | AD_ch05_At.05 | N/A | 138.23 | NAU1221c | View |
33 | TM-1 x 3-79, RIL (2012.v3) | AD_ch05_At.05 | N/A | 148.68 | NAU1221a | View |
34 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 120.96 | NAU1221b | View |
35 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch05_At.05 | N/A | 101.9 | NAU1221 | View |
36 | TM-1 x Hai-7124, BC1 (2012) | AD_ch19_Dt.05 | N/A | 153.7 | NAU1221-215 | View |
Sequence
>NAU1221 ID=NAU1221; Name=NAU1221; organism=Gossypium arboreum; type=genetic_marker; length=242bp CATGCAAATCCATGCTAGAGAGTACTTCAGCAAATTCCCAAGAGTTAACA CCAATGAGAAAGAGACAACAACCAGAGAGNCAAAGCACGAGACCTTCGTT CCCCAGACCCACCCAAAGCCAGAAGAAACAGAGCCAAGGTTCATTCCTTG AAACCCAAATGGTTATGGCCTTTACGGCCAAGAGTCAAGCTCAAGCTCAA GCTCAAGCTCAAGCCGGGCCAATTTCACCACCAAAGAAACCT
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