NAU1218, NAU1218 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1218
Genbank IDBG441138
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(AT)19
PCR ConditionAnnealing temperature: 57
Primer 1NAU1218_F: TGTGATGAAGAACCCTCTCA
Primer 2NAU1218_R: CACTCAACCCAATGAAACAA
Product Length155
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBG441138
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
17235 x TM-1, RIL (2007)AD_ch06_At.06N/A5.6NAU1218aView
2AD-genome wide Reference Map (2009)AD_ch06_At.06N/A151nau1218View
3TM-1 x 3-79, RIL (2012)AD_ch06_At.06N/A53.75nau1218View
4Yumian-1 x T586, F2:7 (2008)AD_ch06_At.06N/A24.2nau1218View
5Yumian-1 x T586, RIL (2006)AD_ch06_At.06N/A29.9nau1218View
6DH962 x Jinmian-6, F2 (2009)AD_ch06_At.06N/A189.5nau1218View
7DH962 x Jinmian-6, F2 (2009)AD_ch06_At.06N/A189.5nau1218View
87235 x TM-1, F2:3 (2005)AD_ch06_At.06N/A28.2nau1218View
9PD6992 x SM3, F2:3 (2005)AD_ch06_At.06N/A0.4nau1218View
10Yumian-1 x T586, RIL (2015)AD_ch06_At.06N/A63.2nau1218View
11DH962 X Ji Mian 5, F2 (2015)AD_ch06_At.06N/A33.99nau1218View
12TM-1 x 3-79, RIL (2014)AD_ch06_At.06N/A53.7nau1218View
13GX1135 x GX100-2, RIL (2015)AD_ch06_At.06N/A35.4nau1218View
14GX1135 x GX100-2, RIL (2016)AD_ch06_At.06N/A81.3nau1218View
15DH962 x Ji Mian 5, RIL (2015)AD_ch06_At.06N/A29.3nau1218View
16TM-1 x Hai-7124, BC1 (2007)AD_ch06_At.06N/A99NAU1218-150View
17TM-1 x Hai-7124, BC1 (2008)AD_ch06_At.06N/A57.62NAU1218-150View
18TM-1 x Hai-7124, BC1 (2012)AD_ch06_At.06N/A56.2NAU1218-150View
19Yumian-1 x T586, RIL (2009)AD_ch06_At.06N/A0NAU1218/150t(C6)View
20TM-1 x 3-79, RIL (2012.v3)AD_ch06_At.06N/A53.75NAU1218View
Sequence
>NAU1218 ID=NAU1218; Name=NAU1218; organism=Gossypium arboreum; type=genetic_marker; length=155bp
TGTGATGAAGAACCCTCTCAAGGCCGTGATCATGCCTCGGTGAGAAAATT
GAAAGCTTAATTAGGCAATTGATATATATATATATATATATATATATATA
TATATATATGTATTTTTACTTTAATAATACTTGGTTTGTTTCATTGGGTT
GAGTG