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Marker Overview
Name | NAU1218 |
Genbank ID | BG441138 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (AT)19 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1218_F: TGTGATGAAGAACCCTCTCA |
Primer 2 | NAU1218_R: CACTCAACCCAATGAAACAA |
Product Length | 155 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch06_At.06 | N/A | 5.6 | NAU1218a | View |
2 | AD-genome wide Reference Map (2009) | AD_ch06_At.06 | N/A | 151 | nau1218 | View |
3 | TM-1 x 3-79, RIL (2012) | AD_ch06_At.06 | N/A | 53.75 | nau1218 | View |
4 | Yumian-1 x T586, F2:7 (2008) | AD_ch06_At.06 | N/A | 24.2 | nau1218 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch06_At.06 | N/A | 29.9 | nau1218 | View |
6 | DH962 x Jinmian-6, F2 (2009) | AD_ch06_At.06 | N/A | 189.5 | nau1218 | View |
7 | DH962 x Jinmian-6, F2 (2009) | AD_ch06_At.06 | N/A | 189.5 | nau1218 | View |
8 | 7235 x TM-1, F2:3 (2005) | AD_ch06_At.06 | N/A | 28.2 | nau1218 | View |
9 | PD6992 x SM3, F2:3 (2005) | AD_ch06_At.06 | N/A | 0.4 | nau1218 | View |
10 | Yumian-1 x T586, RIL (2015) | AD_ch06_At.06 | N/A | 63.2 | nau1218 | View |
11 | DH962 X Ji Mian 5, F2 (2015) | AD_ch06_At.06 | N/A | 33.99 | nau1218 | View |
12 | TM-1 x 3-79, RIL (2014) | AD_ch06_At.06 | N/A | 53.7 | nau1218 | View |
13 | GX1135 x GX100-2, RIL (2015) | AD_ch06_At.06 | N/A | 35.4 | nau1218 | View |
14 | GX1135 x GX100-2, RIL (2016) | AD_ch06_At.06 | N/A | 81.3 | nau1218 | View |
15 | DH962 x Ji Mian 5, RIL (2015) | AD_ch06_At.06 | N/A | 29.3 | nau1218 | View |
16 | TM-1 x Hai-7124, BC1 (2007) | AD_ch06_At.06 | N/A | 99 | NAU1218-150 | View |
17 | TM-1 x Hai-7124, BC1 (2008) | AD_ch06_At.06 | N/A | 57.62 | NAU1218-150 | View |
18 | TM-1 x Hai-7124, BC1 (2012) | AD_ch06_At.06 | N/A | 56.2 | NAU1218-150 | View |
19 | Yumian-1 x T586, RIL (2009) | AD_ch06_At.06 | N/A | 0 | NAU1218/150t(C6) | View |
20 | TM-1 x 3-79, RIL (2012.v3) | AD_ch06_At.06 | N/A | 53.75 | NAU1218 | View |
Sequence
>NAU1218 ID=NAU1218; Name=NAU1218; organism=Gossypium arboreum; type=genetic_marker; length=155bp TGTGATGAAGAACCCTCTCAAGGCCGTGATCATGCCTCGGTGAGAAAATT GAAAGCTTAATTAGGCAATTGATATATATATATATATATATATATATATA TATATATATGTATTTTTACTTTAATAATACTTGGTTTGTTTCATTGGGTT GAGTG
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