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Marker Overview
Name | NAU1201 |
Genbank ID | BG442619 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TCCATC)3 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1201_F: CCGATATCTTACTTTCCAACCT |
Primer 2 | NAU1201_R: AAGGGGTTTGAAGGGTTATC |
Product Length | 165 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch13_At.13 | N/A | 83.8 | NAU1201 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 123 | NAU1201 | View |
3 | Yumian-1 x T586, F2:7 (2008) | AD_ch13_At.13 | N/A | 0 | NAU1201 | View |
4 | Yumian-1 x T586, RIL (2006) | AD_ch13_At.13 | N/A | 15.6 | NAU1201 | View |
5 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 98.1 | NAU1201 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch13_At.13 | N/A | 63.3 | NAU1201 | View |
7 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch13_At.13 | N/A | 60.4 | NAU1201 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch13_At.13 | N/A | 86.3 | NAU1201 | View |
9 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 58.6 | NAU1201-155 | View |
10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 58.95 | NAU1201-155 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 78.1 | NAU1201-155 | View |
12 | Yumian-1 x T586, RIL (2009) | AD_ch13_At.13 | N/A | 3.7 | NAU1201/180t(C13) | View |
Sequence
>NAU1201 ID=NAU1201; Name=NAU1201; organism=Gossypium arboreum; type=genetic_marker; length=165bp CCGATATCTTACTTTCCAACCTCTTTCTTCCATCTCCATCTCCATCTCCT TTCTGCAATTATTCCCAACTTTCCATGGCTTCCTTCACACCCAATCTAGA ACCTGCCCCTGACACCTCTCTTCAGTTCAAGCCCAAGAAACCCAGGATAA CCCTTCAAACCCCTT
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