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Marker Overview
Name | NAU1190 |
Genbank ID | BG443893 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (GGC)6 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1190_F: CCATGTCCGTATCCATGTTA |
Primer 2 | NAU1190_R: TAAGGCAAGATAGGGTCAGG |
Product Length | 239 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch03_At.03 | N/A | 19.1 | NAU1190 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 101 | NAU1190 | View |
3 | TM-1 x 3-79, RIL (2006) | AD_ch03_At.03 | N/A | 66.8 | NAU1190 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 58.2 | NAU1190 | View |
5 | Yumian-1 x T586, F2:7 (2008) | AD_ch03_At.03 | N/A | 27.6 | NAU1190 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch03_At.03 | N/A | 41.9 | NAU1190 | View |
7 | 7235 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 32.6 | NAU1190 | View |
8 | Yumian-1 x T586, RIL (2015) | AD_ch03_At.03 | N/A | 62 | NAU1190 | View |
9 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 58.2 | NAU1190 | View |
10 | 0-153 x sGK9708, RIL (2016) | AD_ch15_Dt.01 | N/A | 25.5 | NAU1190 | View |
11 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.02 | N/A | 83.8 | NAU1190 | View |
12 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 75.2 | NAU1190 | View |
13 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch03_At.03 | N/A | 93.3 | NAU1190 | View |
14 | CCRI-36 x G2005, RIL (2016) | AD_ch03_At.03 | N/A | 66.64 | NAU1190 | View |
15 | TM-1 x Hai-7124, BC1 (2007) | AD_ch03_At.03 | N/A | 62.9 | NAU1190-400 | View |
16 | TM-1 x Hai-7124, BC1 (2008) | AD_ch03_At.03 | N/A | 60.37 | NAU1190-400 | View |
17 | TM-1 x Hai-7124, BC1 (2012) | AD_ch03_At.03 | N/A | 58.6 | NAU1190-400 | View |
18 | Yumian-1 x T586, RIL (2009) | AD_ch03_At.03 | N/A | 43.1 | NAU1190/200y(C3) | View |
19 | DH962 x Jinmian-6, F2 (2009) | AD_ch03_At.03 | N/A | 46.3 | NAU1190a | View |
20 | DH962 x Jinmian-6, F2 (2009) | AD_ch03_At.03 | N/A | 46.3 | NAU1190a | View |
21 | HS427-10 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 0 | NAU1190a | View |
22 | DH962 X Ji Mian 5, F2 (2015) | AD_ch07_At.07 | N/A | 84.01 | NAU1190a | View |
23 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch05_At.05 | N/A | 80.7 | NAU1190_205 | View |
24 | HS427-10 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 0 | NAU1190b | View |
25 | HS427-10 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 2.1 | NAU1190c | View |
26 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 58.17 | NAU1190 | View |
Sequence
>NAU1190 ID=NAU1190; Name=NAU1190; organism=Gossypium arboreum; type=genetic_marker; length=239bp CCATGTCCGTATCCATGTTACCCACCACCAACAGGCAGCGGCGGCGGAGG CGAAGGTGGAGGCGGCGGCGGCGGCGGCACAGTGACACAAACACCTCCAG CTAGTTACTCACCACCCTCCCAAACAGGATCAGTATACCCTCCACCTACA GGGAACTTACCATATTACTATCCACCACCACCTTATGGTGGAGGTAATTC TTTATATGGTCAGCCCCCTCCTGACCCTATCTTGCCTTA
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