NAU1187, NAU1187 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1187
Genbank IDBG444230
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(TCAGGC)3
PCR ConditionAnnealing temperature: 57
Primer 1NAU1187_F: AACAAGAGCCAAGGTTCATC
Primer 2NAU1187_R: GGATGCTGTATAGGGCTCAT
Product Length171
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBG444230
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch05_At.05N/A0NAU1187View
2Zhongmiansuo-12 x 8891, RIL (2007)AD_ch19_Dt.05N/A0.1NAU1187View
3Yumian-1 x T586, RIL (2006)AD_ch05_At.05N/A3.7NAU1187View
4(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch05_At.05N/A73.9NAU1187View
5PD6992 x SM3, F2:3 (2005)AD_ch19_Dt.05N/A0.9NAU1187View
6Yumian-1 x T586, RIL (2015)AD_ch05_At.05N/A54.1NAU1187View
7Baimian 1 x TM-1 , F2:3 (2014)AD_ch19_Dt.05N/A6.7NAU1187View
8Yumian-1 x 7235, RIL (2015)AD_ch05_At.05N/A14.7NAU1187View
9TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch19_Dt.05N/A22.4NAU1187View
10Yumian-1 x T586, RIL (2009)AD_ch05_At.05N/A3.7NAU1187/150yView
11GX1135 x GX100-2, F2 (2013)AD_ch14_Dt.02N/A0NAU1187bView
12CCRI-35 x Yumian-1, RIL (2015)AD_ch05_At.05N/A65.8NAU1187bView
13GX1135 x GX100-2, F2 (2013)AD_ch19_Dt.05N/A52.4NAU1187aView
14CCRI-35 x Yumian-1, RIL (2015)AD_ch14_Dt.02N/A51.4NAU1187aView
15CCRI-35 x Yumian-1, RIL (2017)AD_ch05_At.05N/A98.55NAU1187View
16CCRI-35 x Yumian-1, RIL (2017)AD_ch19_Dt.05N/A49.5NAU1187View
Sequence
>NAU1187 ID=NAU1187; Name=NAU1187; organism=Gossypium arboreum; type=genetic_marker; length=171bp
AACAAGAGCCAAGGTTCATCCCTGAAACCCAAAATGGTTATGGGCCTTTA
CGGGCCACGAGTCAGGCTCAGGCTCAGGCTCANGCTCAAGCCGGCCCANN
TTCACACCAAAGAACCTATGAACCTGTGTCACCCCTGGTAGATGCANCCT
GATGAGCCCTATACAGCATCC