|
Marker Overview
Name | NAU1141 |
Genbank ID | BG447486 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
|
Source Type | EST |
Repeat Motif | (TCCATC)3 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1141_F: CCCCTCTCTCTGTTTCTCAA |
Primer 2 | NAU1141_R: AAGGGGTTTGAAGGGTTATC |
Product Length | 210 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
|
Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch18_Dt.13 | N/A | 29.1 | NAU1141 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 100 | NAU1141 | View |
3 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 165 | NAU1141 | View |
4 | Yumian-1 x T586, F2:7 (2008) | AD_ch13_At.13 | N/A | 4.7 | NAU1141 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch13_At.13 | N/A | 20 | NAU1141 | View |
6 | H18 x 3-79, F2 (2005) | AD_ch18_Dt.13 | N/A | 77.1 | NAU1141 | View |
7 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 98.1 | NAU1141 | View |
8 | Yumian-1 x T586, RIL (2015) | AD_ch13_At.13 | N/A | 65.1 | NAU1141 | View |
9 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 88.2 | NAU1141-200 | View |
10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 31.8 | NAU1141-200 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 50.4 | NAU1141-200 | View |
12 | Yumian-1 x T586, RIL (2009) | AD_ch13_At.13 | N/A | 7.8 | NAU1141/200t(C13) | View |
Sequence
>NAU1141 ID=NAU1141; Name=NAU1141; organism=Gossypium arboreum; type=genetic_marker; length=210bp CCCCTCTCTCTGTTTCTCAACTCATATCCCATACCATGAACATAACCTAT ATGTTACTTTCCAACCTTTTTCTTCCATCTCCATCTCCATCTTGGTTCTG CAATGCTCCCCAACTTTCCATGGCTTCCTTCACACCCAATCTAGAACCTG GCCATGACACCTGTCTTCAGTTCAAGCCCAAGAAACCCAGGATAACCCTT CAAACCCCTT
|