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Marker Overview
Name | NAU1047 |
Genbank ID | BQ403789 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (CCA)7 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1047_F: GCTTGACTTTCCAATTGCTC |
Primer 2 | NAU1047_R: ATCGTCTTCGGTGAAGGTAG |
Product Length | 174 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch23_Dt.09 | N/A | 97.1 | NAU1047 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 158 | NAU1047 | View |
3 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch23_Dt.09 | N/A | 121 | NAU1047 | View |
4 | PD6992 x SM3, F2:3 (2005) | AD_ch23_Dt.09 | N/A | 13.1 | NAU1047 | View |
5 | 60182 x Jun Mian 1, F2:3 (2007) | AD_ch23_Dt.09 | N/A | 20.3 | NAU1047 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch23_Dt.09 | N/A | 64.1 | NAU1047 | View |
7 | W10 x TM-1, F2:3 (2015) | AD_ch23_Dt.09 | N/A | 25.8 | NAU1047 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch23_Dt.09 | N/A | 127.6 | NAU1047 | View |
9 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch23_Dt.09 | N/A | 31.1 | NAU1047 | View |
10 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch23_Dt.09 | N/A | 55.4 | NAU1047b | View |
11 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch23_Dt.09 | N/A | 58.2 | NAU1047a | View |
12 | Prema x 86-1, RIL (2015) | AD_ch04_At.04 | N/A | 49.63 | NAU1047-450 | View |
13 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch23_Dt.09 | N/A | 162.7 | NAU1047 | View |
Sequence
>NAU1047 ID=NAU1047; Name=NAU1047; organism=Gossypium arboreum; type=genetic_marker; length=174bp GCTTGACTTTCCAATTGCTCGCCGTCTTCTTAGTCAACCGAGTTGTAAAA GGAAAGAAACCAGCCGCCACCACCACCACCACCACCATTACCTAAAGCGT TAAAAATGGCGGAGCAAGCTGTTAAGCTTCGGTGCCAACGAATCGGCTGC AATGCTACCTTCACCGAAGACGAT
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