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Marker Overview
Name | NAU1043 |
Genbank ID | BQ404189 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TTC)14 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1043_F: GTATCCGCCCACAAATAAAG |
Primer 2 | NAU1043_R: GCATCGTGAGAGAAAGTGAA |
Product Length | 238 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch06_At.06 | N/A | 0 | NAU1043 | View |
2 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch07_At.07 | N/A | 137.7 | NAU1043 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch07_At.07 | N/A | 91 | NAU1043 | View |
4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch07_At.07 | N/A | 56.78 | NAU1043 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch07_At.07 | N/A | 149 | NAU1043 | View |
6 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_chU | N/A | 0 | NAU1043 | View |
7 | 7235 x TM-1, F2:3 (2005) | AD_ch07_At.07 | N/A | 1.8 | NAU1043 | View |
8 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch16_Dt.07 | N/A | 100.7 | NAU1043 | View |
9 | W10 x TM-1, F2:3 (2015) | AD_ch07_At.07 | N/A | 1.1 | NAU1043 | View |
10 | GX1135 x GX100-2, RIL (2016) | AD_ch07_At.07 | N/A | 43.4 | NAU1043 | View |
11 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch07_At.07 | N/A | 6.7 | NAU1043 | View |
12 | PD6992 x SM3, F2:3 (2005) | AD_ch07_At.07 | N/A | 0 | NAU1043a | View |
13 | PD6992 x SM3, F2:3 (2005) | AD_ch07_At.07 | N/A | 41.1 | NAU1043d | View |
14 | PD6992 x SM3, F2:3 (2005) | AD_ch07_At.07 | N/A | 66.5 | NAU1043c | View |
15 | PD6992 x SM3, F2:3 (2005) | AD_ch07_At.07 | N/A | 86.4 | NAU1043e | View |
16 | PD6992 x SM3, F2:3 (2005) | AD_ch16_Dt.07 | N/A | 72.3 | NAU1043b | View |
17 | Prema x 86-1, RIL (2015) | AD_ch07_At.07 | N/A | 11.87 | NAU1043-650 | View |
Sequence
>NAU1043 ID=NAU1043; Name=NAU1043; organism=Gossypium arboreum; type=genetic_marker; length=238bp GTATCCGCCCACAAATAAAGCAAGCAGCTTTATTAATATCTCTTTAATTC AATTTTCCTTATCTCTCTTTGAGTCTTCAATTGATTGCCCAGATTTTTCT TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTTCAAT TCACGATCTGCATTAGCTATTTTATCATGCTTTTCTTAAAACTTTTCCTT CTCTTTTCTTTGTTTTCCTTCACTTTCTCTCACGATGC
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