NAU1027, NAU1027 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1027
AliasCCRI0996=NAU1027
NAU1027=CCRI0996
CCRI0996
Genbank IDBQ405043
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(CTT)13
PCR ConditionAnnealing temperature: 57
Primer 1NAU1027_F: ATTGGCAGTTGATGACAGTG
Primer 2NAU1027_R: CTTTAAGTCCCTCTCGTTGC
Product Length245
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBQ405043
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt06chromosomeDt06:5785976..5786294 +
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
17235 x TM-1, RIL (2007)AD_ch24_Dt.08N/A0NAU1027View
2CCRI-36 x Hai-7124, F2 (2007)AD_ch06_At.06N/A115.4NAU1027View
3AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A221NAU1027View
4AD-genome wide Reference Map (2009)AD_ch06_At.06N/A26NAU1027View
5(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch25_Dt.06N/A55NAU1027View
6Yumian-1 x 7235, RIL (2015)AD_ch25_Dt.06N/A65.5NAU1027View
Sequence
>NAU1027 ID=NAU1027; Name=NAU1027; organism=Gossypium arboreum; type=genetic_marker; length=245bp
ATTGGCAGTTGATGACAGTGTTATAGACAGGAAGTTATTGGAGAAACTCC
TCAAAGTATCTTCATACCAAGTGACCTGTGTGGACTCTGGGGATAAAGCT
TTGGAATATCTTGGTCTGTTGAATAATCTGGATTCTGACTCAACAGCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCATCTTCTTCTA
ACTCATCTTCTTGTTCCCAATCTTCGCAACGAGAGGGACTTAAAG