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Marker Overview
Name | NAU1014 |
Genbank ID | BQ405578 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TCA)11 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1014_F: GCCTCCACTTGTTTTCTACC |
Primer 2 | NAU1014_R: GGCACCCATATCAGAAGAAG |
Product Length | 180 |
Restriction Enzyme | EcoRI; XhoI |
Polymorphism | P_ NAU1014 |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch11_At.11 | N/A | 0 | NAU1014 | View |
2 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 98 | NAU1014 | View |
3 | TM-1 x 3-79, RIL (2006) | AD_ch11_At.11 | N/A | 67.3 | NAU1014 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch11_At.11 | N/A | 105.6 | NAU1014 | View |
5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch11_At.11 | N/A | 22.4 | NAU1014 | View |
6 | 7235 x TM-1, F2:3 (2005) | AD_ch11_At.11 | N/A | 0 | NAU1014 | View |
7 | Yumian-1 x T586, RIL (2015) | AD_ch11_At.11 | N/A | 72.7 | NAU1014 | View |
8 | Yumian-1 x 7235, RIL (2015) | AD_ch11_At.11 | N/A | 63.7 | NAU1014 | View |
9 | TM-1 x 3-79, RIL (2014) | AD_ch11_At.11 | N/A | 109.3 | NAU1014 | View |
10 | GX1135 x GX100-2, F2 (2013) | AD_ch11_At.11 | N/A | 5.1 | NAU1014 | View |
11 | GX1135 x GX100-2, RIL (2016) | AD_ch11_At.11 | N/A | 196.6 | NAU1014 | View |
12 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch11_At.11 | N/A | 151.4 | NAU1014 | View |
13 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 73 | NAU1014-185 | View |
14 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 74.11 | NAU1014-185 | View |
15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 88.4 | NAU1014-185 | View |
16 | TM-1 x 3-79, RIL (2011) | AD_ch11_At.11 | N/A | 31.9 | NAU1014_276b | View |
17 | Prema x 86-1, RIL (2015) | AD_ch11_At.11 | N/A | 16.09 | NAU1014-150 | View |
18 | TM-1 x 3-79, RIL (2012.v3) | AD_ch11_At.11 | N/A | 109.33 | NAU1014 | View |
19 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch11_At.11 | N/A | 113.3 | NAU1014 | View |
Sequence
>NAU1014 ID=NAU1014; Name=NAU1014; organism=Gossypium arboreum; type=genetic_marker; length=180bp GCCTCCACTTGTTTTCTACCCCCCATCTCCTTTAATCCTATCTCATCATC ATCATCATCATCATCATCATCATCATTTATGGGTCTTGCTCTGGTAAAAA CCCATCATCAAGGTAGCTTTATTATGGGTCAGTTTAGACGGTTGGTTATC AACTGTTCAGCTTCTTCTGATATGGGTGCC
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