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Marker Overview
Name | NAU0998 |
Alias | NAU998
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Genbank ID | BQ406381 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (TCATG)4 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU998_F: CTCTCTCTCACACACGCACT |
Primer 2 | NAU998_R: CTGGCCAAGTGACACAATTA |
Product Length | 166 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | 7235 x TM-1, RIL (2007) | AD_ch03_At.03 | N/A | 36.6 | NAU998 | View |
2 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch03_At.03 | N/A | 0 | NAU998 | View |
3 | 7235 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 80.1 | NAU998 | View |
4 | HS427-10 x TM-1, F2:3 (2005) | AD_ch03_At.03 | N/A | 24.5 | NAU998 | View |
5 | PD6992 x SM3, F2:3 (2005) | AD_ch03_At.03 | N/A | 17.3 | NAU998 | View |
6 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch03_At.03 | N/A | 96.8 | NAU998 | View |
7 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.02 | N/A | 108.5 | NAU998 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch03_At.03 | N/A | 76.9 | NAU998 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch14_Dt.02 | N/A | 101.3 | NAU998 | View |
10 | LMY22 x LY343, RIL (2020) | A03 | N/A | 50.1 | NAU998 | View |
11 | AD-genome wide Reference Map (2009) | AD_ch14_Dt.02 | N/A | 186 | nau0998 | View |
12 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 173 | nau0998 | View |
13 | TM-1 x 3-79, RIL (2006) | AD_ch03_At.03 | N/A | 97.5 | nau0998 | View |
14 | Yumian-1 x T586, F2:7 (2008) | AD_ch14_Dt.02 | N/A | 36.5 | nau0998 | View |
15 | Yumian-1 x T586, RIL (2006) | AD_ch14_Dt.02 | N/A | 55.6 | nau0998 | View |
16 | Yumian-1 x T586, RIL (2015) | AD_ch14_Dt.02 | N/A | 110.4 | nau0998 | View |
17 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 37.71 | NAU0998b | View |
18 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 78.7 | NAU0998b | View |
19 | TM-1 x 3-79, RIL (2012) | AD_ch14_Dt.02 | N/A | 46.55 | NAU0998a | View |
20 | TM-1 x 3-79, RIL (2014) | AD_ch14_Dt.02 | N/A | 79.9 | NAU0998a | View |
21 | TM-1 x Hai-7124, BC1 (2007) | AD_ch14_Dt.02 | N/A | 46.6 | NAU998-160 | View |
22 | TM-1 x Hai-7124, BC1 (2008) | AD_ch14_Dt.02 | N/A | 48.11 | NAU998-160 | View |
23 | TM-1 x Hai-7124, BC1 (2012) | AD_ch14_Dt.02 | N/A | 64.3 | NAU998-160 | View |
24 | Yumian-1 x T586, RIL (2009) | AD_ch14_Dt.02 | N/A | 26.7 | NAU0998/200y(C14) | View |
25 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 78.66 | NAU0998b | View |
26 | TM-1 x 3-79, RIL (2012.v3) | AD_ch14_Dt.02 | N/A | 79.87 | NAU0998a | View |
Sequence
>NAU0998 ID=NAU0998; Name=NAU0998; organism=Gossypium arboreum; type=genetic_marker; length=166bp CTCTCTCTCACACACGCACTCACTCCGTCTCTCATGTCATGTCATGTCAT GCAAGTAGCACCTAAGCTTTTAAGTTTTTAACCCCTCTCTGCGCTCTCTC TCTCTCTCTCTCTCACACACACTCCCTTCACCCCACGACATTTGTTTAAT TGTGTCACTTGGCCAG
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