|
Marker Overview
Name | NAU0895 |
Alias | NAU895
|
Genbank ID | BQ411825 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
|
Source Type | EST |
Repeat Motif | (ACAT)10 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU895_F: CATGATGCACACTTCACACA |
Primer 2 | NAU895_R: CGGTTAAGCTTCCAGACATT |
Product Length | 202 |
Restriction Enzyme | EcoRI; XhoI |
Polymorphism | P_ NAU0895 |
Contact | Zhang, Tian-Zhen
|
Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch02_At.02 | N/A | 171.4 | NAU895a | View |
2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch02_At.02 | N/A | 98.9 | NAU0895 | View |
3 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 11 | NAU0895 | View |
4 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch02_At.02 | N/A | 11.7 | NAU0895 | View |
5 | Yumian-1 x T586, RIL (2015) | AD_ch02_At.02 | N/A | 141.2 | NAU0895 | View |
6 | Yumian-1 x 7235, RIL (2015) | AD_ch02_At.02 | N/A | 97.9 | NAU0895 | View |
7 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch02_At.02 | N/A | 0 | NAU0895 | View |
8 | TM-1 x 3-79, RIL (2012) | AD_ch02_At.02 | N/A | 3.67 | NAU0895a | View |
9 | TM-1 x 3-79, RIL (2014) | AD_ch02_At.02 | N/A | 3.7 | NAU0895a | View |
10 | TM-1 x 3-79, RIL (2012) | AD_ch14_Dt.02 | N/A | 0 | NAU0895b | View |
11 | TM-1 x 3-79, RIL (2014) | AD_ch14_Dt.02 | N/A | 126.4 | NAU0895b | View |
12 | TM-1 x Hai-7124, BC1 (2007) | AD_ch02_At.02 | N/A | 3 | NAU895-260 | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch02_At.02 | N/A | 111.63 | NAU895-260 | View |
14 | TM-1 x Hai-7124, BC1 (2012) | AD_ch02_At.02 | N/A | 108.2 | NAU895-260 | View |
15 | HS427-10 x TM-1, F2:3 (2005) | AD_ch02_At.02 | N/A | 0 | NAU895 | View |
16 | Prema x 86-1, RIL (2015) | AD_ch02_At.02 | N/A | 4.04 | NAU895 | View |
17 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch24_Dt.08 | N/A | 1.4 | NAU895 | View |
18 | GX1135 x GX100-2, F2 (2013) | AD_ch02_At.02 | N/A | 3.3 | NAU895 | View |
19 | GX1135 x GX100-2, RIL (2016) | AD_ch04_At.04 | N/A | 129.2 | NAU895 | View |
20 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.03 | N/A | 110.7 | NAU895 | View |
21 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch02_At.02 | N/A | 119.4 | NAU0895 | View |
22 | TM-1 x 3-79, RIL (2012.v3) | AD_ch02_At.02 | N/A | 3.66 | NAU0895a | View |
23 | TM-1 x 3-79, RIL (2012.v3) | AD_ch14_Dt.02 | N/A | 126.42 | NAU0895b | View |
Sequence
>NAU0895 ID=NAU0895; Name=NAU0895; organism=Gossypium arboreum; type=genetic_marker; length=202bp CATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACA TACATACATACATACATACATACATACATACTTTCTTACAACGACGCCCA TTTTTTGCAAACTAATGCCTCAACAAAGAACTAAGAACAGAAGAAATCTG CAATTGATACACATGGTGATTTACGTCGTAAGAATGTCTGGAAGCTTAAC CG
|