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Marker Overview
Name | NAU0862 |
Alias | NAU862
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Genbank ID | BQ414131 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (CGGCTC)5 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU862_F: AAGAACCACCACCTCCACT |
Primer 2 | NAU862_R: TGGTTATCCAACACCGTCTA |
Product Length | 200 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch03_At.03 | N/A | 106.88 | NAU0862 | View |
2 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch03_At.03 | N/A | 70.43 | NAU0862 | View |
3 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 196 | NAU0862 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 8.74 | NAU0862 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch03_At.03 | N/A | 4.2 | NAU0862 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch03_At.03 | N/A | 12.6 | NAU0862 | View |
7 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 107.6 | NAU0862 | View |
8 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch16_Dt.07 | N/A | 72.2 | NAU0862 | View |
9 | TM-1 x Hai-7124, BC1 (2007) | AD_ch03_At.03 | N/A | 9.2 | NAU862-200 | View |
10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch03_At.03 | N/A | 9.73 | NAU862-200 | View |
11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch03_At.03 | N/A | 12.4 | NAU862-200 | View |
12 | Yumian-1 x T586, RIL (2009) | AD_ch03_At.03 | N/A | 4.2 | NAU0862/220t(C3) | View |
13 | T582 x Hai-7124, F2 (2010) | AD_ch03_At.03 | N/A | 9.2 | NAU862 | View |
14 | PD6992 x SM3, F2:3 (2005) | AD_ch03_At.03 | N/A | 9.8 | NAU862 | View |
15 | GX1135 x GX100-2, RIL (2016) | AD_ch16_Dt.07 | N/A | 93.4 | NAU862 | View |
16 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch14_Dt.02 | N/A | 138.6 | NAU0862 | View |
17 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 107.63 | NAU0862 | View |
18 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch03_At.03 | N/A | 24.7 | NAU862 | View |
Sequence
>NAU0862 ID=NAU0862; Name=NAU0862; organism=Gossypium arboreum; type=genetic_marker; length=200bp AAGAACCACCACCTCCACTGCCAAATGATGATTGCCTGTTCCAAGGTTTG GCCCCACCAAAACCTGATTCGTTACCCTGGGAGCTTCTATCTCTTTGATC AGAAAACTTGTCTCCGTTGTGATTTGGTTCGGCTCCGGCTCCGGCTCCGG CTCCGGCTCCTCCCCACATGCTTGAGTTTCTAGACGGTGTTGGATAACCA
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