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Marker Overview
Name | MUSS0422 |
Alias | MUSS422
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8401 |
Source Type | EST |
Repeat Motif | GT(6) |
PCR Condition | Annealing temperature: 55 |
Primer 1 | MUSS422_F: tggttttgcccatctttacg |
Primer 2 | MUSS422_R: GAAAGGGAAGATGAGGAGGG |
Product Length | 188 |
Contact | Ulloa, Mauricio
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Comment | Primer data obtained in 2007-11 |
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch01_At.01 | N/A | 36.41 | MUSS422a | View |
2 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 64.26 | MUSS422a | View |
3 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 55.5 | MUSS422a | View |
4 | Emian-22 x 3-79, BC1 (2011) | AD_ch15_Dt.01 | N/A | 104.32 | MUSS422b | View |
5 | TM-1 x 3-79, RIL (2012) | AD_ch01_At.01 | N/A | 62.27 | MUSS422b | View |
6 | TM-1 x 3-79, RIL (2014) | AD_ch01_At.01 | N/A | 82.1 | MUSS422b | View |
7 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch15_Dt.01 | N/A | 68.85 | MUSS422 | View |
8 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch01_At.01 | N/A | 56.96 | MUSS422 | View |
9 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch15_Dt.01 | N/A | 39.45 | MUSS422 | View |
10 | TM-1 x 3-79, RIL (2006) | AD_ch01_At.01 | N/A | 39.9 | MUSS422 | View |
11 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch01_At.01 | N/A | 70.97 | MUSS422 | View |
12 | GX1135 x GX100-2, F2 (2013) | AD_ch01_At.01 | N/A | 62.6 | MUSS422 | View |
13 | GX1135 x GX100-2, RIL (2016) | AD_ch01_At.01 | N/A | 120.4 | MUSS422 | View |
14 | 0-153 x sGK9708, RIL (2016) | AD_ch15_Dt.01 | N/A | 16.5 | MUSS422 | View |
15 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 84 | MUSS422 | View |
16 | 0-153 x sGK9708, RIL (2017) | AD_ch01_At.01 | N/A | 69.28 | MUSS422 | View |
17 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 66 | muss0422 | View |
18 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 89 | muss0422 | View |
19 | TM-1 x 3-79, RIL (2012.v3) | AD_ch01_At.01 | N/A | 82.11 | MUSS422b | View |
20 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 55.48 | MUSS422a | View |
21 | MGG-293-793, MAGIC (2018) | AD_ch01_At.01 | N/A | 95.1 | MUSS422a | View |
22 | MGG-293-793, MAGIC (2018) | AD_ch15_Dt.01 | N/A | 115.6 | MUSS422b | View |
Sequence
>MUSS0422 ID=MUSS0422; Name=MUSS0422; organism=Gossypium arboreum; type=genetic_marker; length=188bp TGGTTTTGCCCATCTTTACGTATTTCCGGGACCGAATCAAACCCAGCAGG CAGCAGGCAGCAGGCAGCAGGCAAAGAGAGAGAGTGTGTGTGTGTTTCTC ACCTTACCTTAAAATATATTAACAATTTTTTTAAAATGACGGTTTCAATA TTTTATAACATTCCATCACCCTCCTCATCTTCCCTTTC
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