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Marker Overview
| Name | MUSS0145 |
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| Alias | MUSS145
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium arboreum |
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| Germplasm | AKA 8401 |
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| Source Type | EST |
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| Repeat Motif | TA(9) |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | MUSS145_F: GTGTTCCTTCCGGTACTTATGG |
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| Primer 2 | MUSS145_R: AACCCAAAGGAAAACAACAGC |
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| Product Length | 252 |
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| Contact | Ulloa, Mauricio
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| Comment | Primer data obtained in 2007-11 |
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Alignments
The following features are aligned
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | TM-1 x 3-79, RIL (2012) | AD_ch04_At.04 | N/A | 75.72 | MUSS145a | View |
| 2 | Yumian-1 x T586, RIL (2015) | AD_ch04_At.04 | N/A | 67 | MUSS145a | View |
| 3 | TM-1 x 3-79, RIL (2014) | AD_ch04_At.04 | N/A | 77.1 | MUSS145a | View |
| 4 | TM-1 x 3-79, RIL (2012) | AD_ch22_Dt.04 | N/A | 49.33 | MUSS145b | View |
| 5 | Yumian-1 x T586, RIL (2015) | AD_ch22_Dt.04 | N/A | 71.7 | MUSS145b | View |
| 6 | TM-1 x 3-79, RIL (2014) | AD_ch22_Dt.04 | N/A | 82 | MUSS145b | View |
| 7 | Yumian-1 x T586, RIL (2006) | AD_ch04_At.04 | N/A | 0 | MUSS145 | View |
| 8 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch04_At.04 | N/A | 35.9 | MUSS145 | View |
| 9 | Yumian-1 x T586, RIL (2009) | AD_ch04_At.04 | N/A | 51.2 | MUSS145/220t | View |
| 10 | TM-1 x 3-79, RIL (2012.v3) | AD_ch04_At.04 | N/A | 76.75 | MUSS145a | View |
| 11 | TM-1 x 3-79, RIL (2012.v3) | AD_ch22_Dt.04 | N/A | 81.97 | MUSS145b | View |
Sequence
>MUSS0145 ID=MUSS0145; Name=MUSS0145; organism=Gossypium arboreum; type=genetic_marker; length=228bp
GTGTTCCTTCCGGTACTTATGGGAACAAACACGAGTGTCCTTGCTACAGA
GACAAGGTGAATAACAAGGGCAAACCCAAATGCCCTTGAAAATGAAATAT
ATTCGAGTTCGGGATTTCATCAAGCTTAAAGATCGAGGACGAAGAGGCTA
TATATATATATATATATGCATGCTGATGGTGTTATTATAAAAATAAACTG
TTTTGTTGCTGTTGTTTTCCTTTGGGTT
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