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Marker Overview
Name | MUSS0073 |
Alias | MUSS073
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8401 |
Source Type | EST |
Repeat Motif | TTTTA(3) |
PCR Condition | Annealing temperature: 55 |
Primer 1 | MUSS073_F: TCTCCATGAAACCAAACAAACC |
Primer 2 | MUSS073_R: TTAATGCTATTTTCTCCGTCGC |
Product Length | 217 |
Contact | Ulloa, Mauricio
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Comment | Primer data obtained in 2007-11 |
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch02_At.02 | N/A | 80.74 | MUSS073 | View |
2 | TM-1 x 3-79, RIL (2006) | AD_ch02_At.02 | N/A | 52.3 | MUSS073 | View |
3 | Yumian-1 x T586, RIL (2006) | AD_ch02_At.02 | N/A | 11.2 | MUSS073 | View |
4 | Yumian-1 x T586, RIL (2015) | AD_ch02_At.02 | N/A | 69.3 | MUSS073 | View |
5 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch02_At.02 | N/A | 51.9 | MUSS073 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch02_At.02 | N/A | 64 | muss0073 | View |
7 | TM-1 x 3-79, RIL (2012) | AD_ch02_At.02 | N/A | 51.92 | MUSS073b | View |
8 | TM-1 x 3-79, RIL (2014) | AD_ch02_At.02 | N/A | 52.7 | MUSS073b | View |
9 | TM-1 x 3-79, RIL (2012) | AD_ch17_Dt.03 | N/A | 67.86 | MUSS073a | View |
10 | TM-1 x 3-79, RIL (2014) | AD_ch17_Dt.03 | N/A | 50.4 | MUSS073a | View |
11 | Yumian-1 x T586, RIL (2009) | AD_ch02_At.02 | N/A | 82 | MUSS073/200y | View |
12 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch02_At.02 | N/A | 65.31 | MUSS073 | View |
13 | TM-1 x 3-79, RIL (2012.v3) | AD_ch02_At.02 | N/A | 52.73 | MUSS073b | View |
14 | TM-1 x 3-79, RIL (2012.v3) | AD_ch17_Dt.03 | N/A | 50.41 | MUSS073a | View |
Sequence
>MUSS0073 ID=MUSS0073; Name=MUSS0073; organism=Gossypium arboreum; type=genetic_marker; length=217bp TCTCCATGAAACCAAACAAACCTTTACAACTTAATACTTGCACAATCAAG CTCAGCTCAAAAACAAGCTCTACTAAAATCAAGAAAGTATCGCTCTTATT TTTATTTTATTTTATTTTTTTGGGGGGGGGGGGAGAATTTATTAGAAAAT CATGAAAATAGAAAAAAGTTGAAAGAGTAAAAGTAGCACCTATTGGCGAC GGAGAAAATAGCATTAA
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