MUSB1093, MUSB1093 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1093
Genbank IDDX544853
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX544853.2
Source TypeEST
Repeat Motif(ATAA)3
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1093_F: ACATTGTGGATTGGTGGGTTCC
Primer 2MUSB1093_R: AGCACTTCCAATCAGACCACC
Product Length285
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1093
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX544853
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX544853.2DX544853.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch22_Dt.04N/A58.85MUSB1093View
2Guazuncho-2 x VH8-4602, RIL (2009)AD_ch22_Dt.04N/A52.78MUSB1093View
3TM-1 x 3-79, RIL (2006)AD_ch22_Dt.04N/A61.5MUSB1093View
4TM-1 x 3-79, RIL (2012)AD_ch22_Dt.04N/A20.73MUSB1093View
5AD-genome wide Reference Map (2009)AD_ch22_Dt.04N/A142MUSB1093View
6TM-1 x 3-79, RIL (2014)AD_ch22_Dt.04N/A54.9MUSB1093View
7TM-1 x 3-79, RIL (2012.v3)AD_ch22_Dt.04N/A54.91MUSB1093View
Sequence
>MUSB1093 ID=MUSB1093; Name=MUSB1093; organism=Gossypium hirsutum; type=genetic_marker; length=285bp
ACATTGTGGATTGGTGGGTTCCATCCACTTTGATAATATGATTAATATAC
CAAGTATATACCAGGGGAAGGTGGTATTTGCATTGGGTGACCATAAATAA
ATAAATGAAACTAGAAGGTGGAGCAAGGTTTGGGTAAGTAATGGAATATC
GCTTAAAAATTAGCCCATAACTTTAGCATATTCAATCACACCTTTCTCTT
TCCCATTTCTAAGCCTTGGTTCTTGATTCATCGTTTTCCTTGTTCCAGTT
TTTATGCCCTTAGTGGTGGTCTGATTGGAAGTGCT