MUSB1081, MUSB1081 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1081
Genbank IDDX553881
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX553881.2
Source TypeEST
Repeat Motif(CATG)3
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1081_F: ACATTGCACCAAGCCCTACATG
Primer 2MUSB1081_R: AGTTTCTCGTGACTTGGCAACTC
Product Length178
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1081
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX553881
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX553881.2DX553881.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2006)AD_ch07_At.07N/A39.9MUSB1081View
2Emian-22 x 3-79, BC1 (2011)AD_ch07_At.07N/A96.62MUSB1081View
3TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A85.47MUSB1081View
4TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A52.9MUSB1081View
5TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A52.85MUSB1081View
6PD 94042 x (AD)4-08, F2 (2016)AD_ch05_At.05N/A254.8MUSB1081aView
7PD 94042 x (AD)4-08, F2 (2016)AD_ch09_At.09N/A23.5MUSB1081bView
Sequence
>MUSB1081 ID=MUSB1081; Name=MUSB1081; organism=Gossypium hirsutum; type=genetic_marker; length=178bp
ACATTGCACCAAGCCCTACATGAACTTGCATTAATTTCCTTCCATGCATG
CATGTGTACTGTCCAAAGGGATTGGATCTTCTAGATACATTCATGCATGA
ATCTTCATCATTCATGTAACCGAATGTGATACGGGGTTGTGCGCGAACCA
AGATCGAGTTGCCAAGTCACGAGAAACT