MUSB1064, MUSB1064 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1064
Genbank IDDX527086
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX527086.2
Source TypeEST
Repeat Motif(AT)5
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1064_F: GCGGTAGCGATTGAAGGCTC
Primer 2MUSB1064_R: ACTTCGGCAACGGTCTCG
Product Length321
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1064
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX527086
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX527086.2DX527086.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch06_At.06N/A94.82MUSB1064View
2AD-genome wide Reference Map (2009)AD_ch06_At.06N/A101MUSB1064View
3AD-genome wide Reference Map (2009)AD_ch10_At.10N/A148MUSB1064View
4AD-genome wide Reference Map (2009)AD_ch15_Dt.01N/A148MUSB1064View
5TM-1 x 3-79, RIL (2006)AD_ch10_At.10N/A42.6MUSB1064aView
6TM-1 x 3-79, RIL (2012)AD_ch10_At.10N/A62.18MUSB1064aView
7TM-1 x 3-79, RIL (2014)AD_ch10_At.10N/A67.3MUSB1064aView
8TM-1 x 3-79, RIL (2006)AD_ch15_Dt.01N/A27.6MUSB1064bView
9TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A37.03MUSB1064dView
10TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A107.4MUSB1064dView
11TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A107.35MUSB1064dView
12TM-1 x 3-79, RIL (2012.v3)AD_ch10_At.10N/A67.33MUSB1064aView
Sequence
>MUSB1064 ID=MUSB1064; Name=MUSB1064; organism=Gossypium hirsutum; type=genetic_marker; length=321bp
GCGGTAGCGATTGAAGGCTCAAGGAATGCCTTGTGGTGAAAAACCATATA
ATTTCTTTTCATTTATTTTCTAGAAATATAACAATTGAAACCTTGGCTTA
CAATTTTATTTTAATTACCTATCTCCTTATATATTTATTTTATATTTTTT
ATAATATATATTATTTAATGTTATAATTATGACATATATATATGAGATGA
TCCACAGTTGATCGATTAAAAATAAGAAGTGTGGTAATGAGAAAATACAT
GTGTTGTATTGTTTTATTAACTTCTTTAGGTTATTCGTGTAACACCCCAT
ACCCGAGACCGTTGCCGAAGT