MUSB1048, MUSB1048 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1048
Genbank IDDX536236
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX536236
Source TypeEST
Repeat Motif(GAA)5
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1048_F: CCCTTGTCTTCACCTCTGAAGC
Primer 2MUSB1048_R: AGGGCAATTGATTCTCTGGTGG
Product Length236
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1048
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX536236
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX536236DX536236Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch20_Dt.10N/A139.21MUSB1048View
2TM-1 x 3-79, RIL (2006)AD_ch20_Dt.10N/A0MUSB1048View
3TM-1 x 3-79, RIL (2012)AD_ch10_At.10N/A35.17MUSB1048View
4TM-1 x 3-79, RIL (2014)AD_ch10_At.10N/A38MUSB1048View
5TM-1 x 3-79, RIL (2012.v3)AD_ch10_At.10N/A38.05MUSB1048View
Sequence
>MUSB1048 ID=MUSB1048; Name=MUSB1048; organism=Gossypium hirsutum; type=genetic_marker; length=236bp
CCCTTGTCTTCACCTCTGAAGCTCAAGAAAACCTGATACTGCATTCTTTT
AGAAGATGAAGAAGAAGAAGAAGCCATGGAAGAGTATTGAAGCAAAAGAA
AGAAAAATATAGCAAGTGAGTTTTGCTTGGGTTGTGGTCTTATATTAAGA
AGAACAAGTGTAAAATATGCATAATCTTTGGTATCCTTTTATTAAAAGGG
CAAGAGATTGAACACCACCAGAGAATCAATTGCCCT