MUSB0984, MUSB0984 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0984
Genbank IDDX546520
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX546520
Source TypeEST
Repeat Motif(TTAA)3
PCR ConditionAnnealing temperature: 50
Primer 1MUSB0984_F: ACAAACTATCATTTGCGTCCCATGC
Primer 2MUSB0984_R: CCTCCGAGAAGTGCCAACAA
Product Length339
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0984
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX546520
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX546520DX546520Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch18_Dt.13N/A109.78MUSB0984View
2TM-1 x 3-79, RIL (2006)AD_ch18_Dt.13N/A14.4MUSB0984View
3TM-1 x 3-79, RIL (2012)AD_ch18_Dt.13N/A22.58MUSB0984View
4Guazuncho-2 x VH8-4602, RIL (2009)AD_ch18_Dt.13N/A90.54MUSB0984View
5TM-1 x 3-79, RIL (2014)AD_ch18_Dt.13N/A23.6MUSB0984View
6TM-1 x 3-79, RIL (2012.v3)AD_ch18_Dt.13N/A23.63MUSB0984View
7PD 94042 x (AD)4-08, F2 (2016)AD_ch08_At.08N/A144.5MUSB0984View
Sequence
>MUSB0984 ID=MUSB0984; Name=MUSB0984; organism=Gossypium hirsutum; type=genetic_marker; length=339bp
ACAAACTATCATTTGCGTCCCATGCATGTGACGATATTACTTTGGGTAAA
CTATATCGGTAGTCACTCGACTATTAGTATATTTCTATTTTGGTCACCCA
ACTCTAAAAATTTTCAATTTAGTCAAATTTAAGCGTTAAATACGTGTTTT
AATTAATTAAATCATTATCAAAGGAATGACTAAAATACCAAAACTCCGGT
GAAGGGGTTATTTAAAAAATCCAAAAAAATTTTAGAAGTTAGGTAAAGCA
AAANAGGAANCAGTCTCAATATATTTTTAACAGCGGCCTTGTTTTAAACC
CAGTTCCACTCATTAAAATTTGTTGGCACTTCTCGGAGG