MUSB0972, MUSB0972 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0972
Genbank IDDX539627
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX539627.2
Source TypeEST
Repeat Motif(AT)5
PCR ConditionAnnealing temperature: 50
Primer 1MUSB0972_F: TCAGGTTAGCTCGGCATTGG
Primer 2MUSB0972_R: ACCCTGTGTTGGCGTAGG
Product Length183
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0972
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX539627
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX539627.2DX539627.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch13_At.13N/A115.38MUSB0972View
2TM-1 x 3-79, RIL (2006)AD_ch18_Dt.13N/A13.5MUSB0972View
3TM-1 x 3-79, RIL (2012)AD_ch13_At.13N/A71.34MUSB0972View
4TM-1 x 3-79, RIL (2014)AD_ch13_At.13N/A67.2MUSB0972View
5TM-1 x 3-79, RIL (2012.v3)AD_ch13_At.13N/A67.16MUSB0972View
Sequence
>MUSB0972 ID=MUSB0972; Name=MUSB0972; organism=Gossypium hirsutum; type=genetic_marker; length=183bp
TCAGGTTAGCTCGGCATTGGAGATCGTCAGAGGTAGCACCACACTATCAA
GCCATCACCTTTGAATATTGATATATATATTAAGCATTTTCAAGTGAGTG
GCATGTATAGGGGCTTCATTTTTATAATATGTGTAATTATGATTTGTAAC
ACCCTTTACCCATGTCCTACGCCAACACAGGGT