MUSB0944, MUSB0944 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0944
Genbank IDDX537893
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX537893
Source TypeEST
Repeat Motif(AAATA)3
PCR ConditionAnnealing temperature: 50
Primer 1MUSB0944_F: TGTGAGTTTCTCGATGTGTTTCCGA
Primer 2MUSB0944_R: AGACCATCTCAACGAGGACTCC
Product Length236
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0944
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX537893
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D08chromosomeD08:30535028..30535263 +
Dt_chr4chromosomeDt_chr4:36029714..36030398 +
D08chromosomeD08:28641329..28641564 +
Ghir_D08chromosomeGhir_D08:31154365..31154600 +
D08chromosomeD08:31594357..31594592 +
D08chromosomeD08:30864741..30865425 +
D08chromosomeD08:29206103..29206787 +
D08chromosomeD08:31114257..31114492 +
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX537893DX537893Gossypium hirsutumsequence_feature


Sequence
>MUSB0944 ID=MUSB0944; Name=MUSB0944; organism=Gossypium hirsutum; type=genetic_marker; length=236bp
TGTGAGTTTCTCGATGTGTTTCCGAAAGAATAAGCTATTAAACTAATCAA
TGAGCTTGAAATAAAATAAAATAATGAAAGTAATCGCTTAGTTTATTCTA
GCAATAAAGTAAATGAGCTGGAAATAAGTTGGAATGAGCTCAAATGAGCT
AATTTGAGCTGAACGAAGTTCGGGGAGCTGGAAAGGAGCTAGGGTCGACT
TGCAATAGATGCAAGGAGTCCTCGTTGAGATGGTCT