MUSB0625, MUSB0625 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0625
Genbank IDDX822929
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822929.1
Source TypeEST
Repeat Motif(TTTC)3
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0625_F: GGGTGGAAATTGTATATGTTGAGG
Primer 2MUSB0625_R: TTGAAGAAGAAGGGGAAGATGG
Product Length245
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0625
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822929
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822929.1DX822929.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch10_At.10N/A52musb0625View
2TM-1 x 3-79, RIL (2006)AD_ch10_At.10N/A77.2MUSB0625bView
3TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A66.46MUSB0625bView
4TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A70.2MUSB0625bView
5TM-1 x 3-79, RIL (2006)AD_ch07_At.07N/A0MUSB0625aView
6TM-1 x 3-79, RIL (2012)AD_ch10_At.10N/A92.71MUSB0625fView
7TM-1 x 3-79, RIL (2014)AD_ch10_At.10N/A96.7MUSB0625fView
8TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A70.24MUSB0625bView
9TM-1 x 3-79, RIL (2012.v3)AD_ch10_At.10N/A96.65MUSB0625fView
Sequence
>MUSB0625 ID=MUSB0625; Name=MUSB0625; organism=Gossypium hirsutum; type=genetic_marker; length=245bp
GGGTGGAAATTGTATATGTTGAGGAAGTGTNTCNNTTNNTTATCTTTTGT
TTTTCTTTTTTTTTTTATTTTNATCTTATTTATTTTATCTTAATTACTTA
TTATCATCAATTTACATTTTCACTATTTATTAAACCTTCTTTTTTCTACT
TTTAAACTTTTTTCTCTTCTCCTTATTATAATCTTCTTTCTTTTTTTCTT
TCTTTCTCTTATCTATTATACTTCCATCTTCCCCTTCTTCTTCAA