MUSB0611, MUSB0611 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0611
Genbank IDDX822915
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822915
Source TypeEST
Repeat Motif(AT)5
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0611_F: TCTATGTTTTGCATGCCTGGT
Primer 2MUSB0611_R: TCAAACGAACACACACACACA
Product Length283
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0611
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822915
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822915DX822915Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch03_At.03N/A83musb0611View
2TM-1 x 3-79, RIL (2006)AD_ch03_At.03N/A57musb0611View
3TM-1 x 3-79, RIL (2012)AD_ch03_At.03N/A62.67musb0611View
4TM-1 x 3-79, RIL (2014)AD_ch03_At.03N/A53.7musb0611View
5TM-1 x 3-79, RIL (2012.v3)AD_ch03_At.03N/A53.7MUSB0611View
6PD 94042 x (AD)4-08, F2 (2016)AD_ch07_At.07N/A207.4MUSB0611View
Sequence
>MUSB0611 ID=MUSB0611; Name=MUSB0611; organism=Gossypium hirsutum; type=genetic_marker; length=283bp
TCTATGTTTTGCATGCCTGGTACATGTATAAAGTGTCTATGATTACAAGT
GTTTATTAATTATATACATGTGATGGTTATAAGATTTTATTAATTAAGTG
TAAGTAGTGAATGGGTATAATGCAATATATAGGCTATTTTTATTATTATT
GTTTCATGTAGATAACAGTGAAATGTTCTAATTTAAAGGAAGTATTAATT
TATGAAATTAATTTTAATTAACCTTTGAGACTTACGTTTGTGAATAATCA
TATATATATGTGTGTGTGTGTGTGTTCGTTTGA