MUSB0570, MUSB0570 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0570
Genbank IDDX822878
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822878.1
Source TypeEST
Repeat Motif(AAT)4
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0570_F: TGATTTAACGTGCCACATCAG
Primer 2MUSB0570_R: ACCCAAACCCTCTCACTTTTC
Product Length351
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0570
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822878
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822878.1DX822878.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2006)AD_ch17_Dt.03N/A10.1MUSB0570View
2TM-1 x 3-79, RIL (2012)AD_ch17_Dt.03N/A56.55MUSB0570View
3TM-1 x 3-79, RIL (2014)AD_ch17_Dt.03N/A37.2MUSB0570View
4TM-1 x 3-79, RIL (2012.v3)AD_ch17_Dt.03N/A37.16MUSB0570View
5PD 94042 x (AD)4-08, F2 (2016)AD_ch23_Dt.09N/A60.9MUSB0570View
Sequence
>MUSB0570 ID=MUSB0570; Name=MUSB0570; organism=Gossypium hirsutum; type=genetic_marker; length=351bp
TGATTTAACGTGCCACATCAGTTTACTGTTACACTATTAACAGAAACTAA
CGGCTCAGTGACTAAAACGTTACAACGTGATAACATAAGTGACTAAAACG
TAACATTTCAAACATAAGTGACTAAAATGTAACCTGAACCAAACAAAAGC
GACTTTTTTGTTATTTTACCCATAAAAATATTGTTACAATACAACTAGAT
CCATGTTAGAGAACATAAATTTGAAACCATATATATTTGATTTTTTTTCA
AAGCAAAATAATAATAATAAAATAAGATACTTGAGTATGACTAGACTTGT
CCATGCCCGGCCAGGCTCGAAGGCCCGCCCGAAAAGTGAGAGGGTTTGGG
T