MUSB0536, MUSB0536 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0536
Genbank IDDX822844
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822844
Source TypeEST
Repeat Motif(TGAA)3
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0536_F: GTCCAACAAGGGGAAATCG
Primer 2MUSB0536_R: TGTTAACCCGCACTTTAGGC
Product Length226
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0536
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822844
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822844DX822844Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, RIL (2006)AD_ch06_At.06N/A15MUSB0536View
2Yumian-1 x T586, RIL (2015)AD_ch06_At.06N/A64.9MUSB0536View
3Yumian-1 x T586, RIL (2009)AD_ch06_At.06N/A16.2MUSB0536/500yView
Sequence
>MUSB0536 ID=MUSB0536; Name=MUSB0536; organism=Gossypium hirsutum; type=genetic_marker; length=226bp
GTCCAACAAGGGGAAATCGAAAGTCATCGAGTAGCCGACTCGGAATATTT
TACCAACGTAAAGTAGTCATTAGCATATAGTTGGTATTAATTCAATGGTC
ATACGTCTATGAATGATGCTGAATGAATGAATAATATATTATGCATGTAC
GTAGTGATGATGAAGTGTGAATAAAGGAAAGAGTGAAAGTATTGAGTTTT
GATTCCGCCTAAAGTGCGGGTTAACA