MUSB0463, MUSB0463 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0463
Genbank IDDX822778
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822778
Source TypeEST
Repeat Motif(AAGA)3
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0463_F: CCAAGAGAAAAACGGCAAGG
Primer 2MUSB0463_R: CCTCGTACTCGAAATTGACG
Product Length272
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0463
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822778
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822778DX822778Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch07_At.07N/A59.1MUSB0463View
2Guazuncho-2 x VH8-4602, RIL (2009)AD_ch07_At.07N/A32.68MUSB0463View
3TM-1 x 3-79, RIL (2006)AD_ch07_At.07N/A76.8MUSB0463View
4TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A63.12MUSB0463View
5TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A75.8MUSB0463View
6TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A75.8MUSB0463View
Sequence
>MUSB0463 ID=MUSB0463; Name=MUSB0463; organism=Gossypium hirsutum; type=genetic_marker; length=272bp
CCAAGAGAAAAACGGCAAGGCAGGGGNNNAAAGAAGGTTGACGAANGNNG
NGCANCNGCGAAANAGGGACCAAACCGNAAGAAANGNGAAAGCNCAGGGC
AAAAGNGAATTTTTTTCTTAATACGCGNCNAAGGATAAAACTGAATGAGT
AGTTGACTAAATGGGTTAATTTTGAATACATATAGATCAAGAAAGAAAGA
ATTCGGATATAGATCGGGGGAAATCGAAAGTTATCGAGTAATTGATCCGA
TTCGTCAATTTCGAGTACGAGG