MUSB0456, MUSB0456 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0456
Genbank IDDX822770
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822770
Source TypeEST
Repeat Motif(TA)7
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0456_F: CTGGGAAGGCTTTACGTGAATA
Primer 2MUSB0456_R: TGTGGATAAGAAGCTACTGGGAAT
Product Length402
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0456
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822770
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D10chromosomeD10:52337978..52338380 +
D10chromosomeD10:49840935..49841337 +
D10chromosomeD10:51049954..51050356 +
D10chromosomeD10:49348835..49349237 +
D10chromosomeD10:51160868..51161270 +
CM017632.1chromosomeCM017632.1:50008866..50009266 +
D10chromosomeD10:52397237..52397639 +
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822770DX822770Gossypium hirsutumsequence_feature


Sequence
>MUSB0456 ID=MUSB0456; Name=MUSB0456; organism=Gossypium hirsutum; type=genetic_marker; length=402bp
CTGGGAAGGCTTTACGTGAATATCACCTCTAGCTCAAACATGATTTTACT
TGGACTATAAAACGGATAAAGACACCTATTATATATATATATAAAAGTAA
TGTGTTTCAATTAAATAAAAAGAAGTTTCAAAAGCTTTACGAGCTATATG
AGATTTTGGATAAATTATAAAATATGTTTGATATATTACTTAAAATTAAG
CACGAAATATAATTAGACCATTTGATAAGTGTAAATTTTAAATTATGAAC
ACTTGTGATTCTATCCTTATTTTTAAAAATATTTCTTGTTATTTTAAACA
AAGTAAAATTTTAAATGTAAAACCTTTAAAGGATAATATGACATAAAAAG
ATATAAGTAAGATAAGATTAATTGAAATATTCCCAGTAGCTTCTTATCCA
CA