MUSB0450, MUSB0450 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0450
Genbank IDDX822766
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822766
Source TypeEST
Repeat Motif(CAGG)3
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0450_F: CGACGAAGAGACCACCAATC
Primer 2MUSB0450_R: GTTCCTGTCTCGCCTTCTTG
Product Length216
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0450
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822766
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822766DX822766Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch13_At.13N/A96.87MUSB0450View
2Yumian-1 x T586, RIL (2006)AD_ch13_At.13N/A24.2MUSB0450View
3Yumian-1 x T586, RIL (2015)AD_ch13_At.13N/A71.5MUSB0450View
4TM-1 x 3-79, RIL (2014)AD_ch13_At.13N/A92.1MUSB0450View
5Yumian-1 x T586, RIL (2009)AD_ch13_At.13N/A17.2MUSB0450/380yView
6TM-1 x 3-79, RIL (2012.v3)AD_ch13_At.13N/A92.08MUSB0450View
Sequence
>MUSB0450 ID=MUSB0450; Name=MUSB0450; organism=Gossypium hirsutum; type=genetic_marker; length=216bp
CGACGAAGAGACCACCAATCAACCGACAAAAACGACAGGGAAGCAACCAG
GCAGGCAGGACCGGAAGGAGCAGGAGAAGCGCACACACCCACCCCAGCGG
GCGCAGGACNAGGGCAAAACGACAACGCCGGGGACCCAACCCGGACAGAC
AGCGCCCCGGAAGAAACCAGCAAGAAGCAGCCCCGAAAAAGCCGCCCAAG
AAGGCGAGACAGGAAC