MUSB0444, MUSB0444 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0444
Genbank IDDX822761
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822761
Source TypeEST
Repeat Motif(GAA)8
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0444_F: TGATTTCATTGTGGGGACAC
Primer 2MUSB0444_R: ATTTACCGCCTCATGCAAAG
Product Length213
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0444
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822761
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822761DX822761Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch03_At.03N/A73musb0444View
2TM-1 x 3-79, RIL (2006)AD_ch03_At.03N/A54.2musb0444View
3TM-1 x 3-79, RIL (2012)AD_ch03_At.03N/A65.78musb0444View
4TM-1 x 3-79, RIL (2014)AD_ch03_At.03N/A50.6musb0444View
5TM-1 x 3-79, RIL (2012.v3)AD_ch03_At.03N/A50.59MUSB0444View
Sequence
>MUSB0444 ID=MUSB0444; Name=MUSB0444; organism=Gossypium hirsutum; type=genetic_marker; length=213bp
TGATTTCATTGTGGGGACACAATGACTACCGATGCTTAGCTATAATGGAC
TAAGGAGACCATGCAAAATTAGGAAACATATATGTGTGGAGAGAAAAGAT
TTCTCCTGAATTAACCAGTAATCTCCTTCTCATTTGCAACGTCTTTTTCG
GTTGCTCCGAAGAAGAAGAAGAAGAAGAAGAAGTTCAGGAAAGCTTTGCA
TGAGGCGGTAAAT