MUSB0410, MUSB0410 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0410
Genbank IDDX822730
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822730
Source TypeEST
Repeat Motif(GT)5
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0410_F: TTTTGTAACACCCCACACTCG
Primer 2MUSB0410_R: GGATGGAAACTTCGTTTATGG
Product Length344
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0410
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822730
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt_chr9chromosomeDt_chr9:6033059..6033395 -
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822730DX822730Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, RIL (2006)AD_ch05_At.05N/A99.4MUSB0410View
2Yumian-1 x T586, RIL (2015)AD_ch05_At.05N/A88.4MUSB0410View
3Yumian-1 x T586, RIL (2009)AD_ch05_At.05N/A99.4MUSB0410/420tView
Sequence
>MUSB0410 ID=MUSB0410; Name=MUSB0410; organism=Gossypium hirsutum; type=genetic_marker; length=344bp
TTTTGTAACACCCCACACTCGACGTAGAAGTTATGACTAGATCTTGAGGA
ATTACATTAACTCTTAAAAAAAAATTCTGATTTTATCTAACTTAGTGTGT
GTGTCAAAATATAAGTTTGGCAAAACTCTTACATATTTTTGGAAACTCTC
ATGTTCGAAAAAACACTTATTTTAACAGAAAAACCACCAAATAACATTAC
AGCAGAAATTTTTTAAGTTTTTATTTTTGGAAACTGATTTTCTATTTATT
AATTCATACGTTATCATAGTCTTATGAATAAAATACCAAATTCAACAAAA
TGAGCCAAAACTATAAAGAAAGTCCATAAACGAAGTTTCCATCC