MUSB0326, MUSB0326 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0326
Genbank IDDX822652
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822652
Source TypeEST
Repeat Motif(AT)5
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0326_F: CAGGGAAAATTAACGGCAAG
Primer 2MUSB0326_R: GGAACGACTTCAACGGGTTA
Product Length333
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0326
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822652
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold145687supercontigscaffold145687:24..319 +
CM017644.1chromosomeCM017644.1:33763960..33764292 -
CM017644.1chromosomeCM017644.1:33755219..33755551 -
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822652DX822652Gossypium hirsutumsequence_feature


Sequence
>MUSB0326 ID=MUSB0326; Name=MUSB0326; organism=Gossypium hirsutum; type=genetic_marker; length=333bp
CAGGGAAAATTAACGGCAAGTGATTTGGAGTTTAGTAGCTCCAGTTATAA
GTAATTTAGTAACTACTGCTCANGANAACAGCTCGTAGTGAATATGTGAT
TTTGTTGTAAACATTAATGGAAGTTTGCCGATGAATTATTTATTGATTAT
TATAAAGCTACTATAAGCTATGTGTGTGAAAGTCGGAATCATATATATAT
TATTCTGAAAATAATACTTGAATAGTCGATTAATGACTATTTTAAATTTT
GTTGAACTTAACCTCAAGAGCAAAAGGGGACTAGATCCGATAAGGGAAGG
AAAAAGTAATGAATAACCCGTTGAAGTCGTTCC