MUSB0175, MUSB0175 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0175
Genbank IDDX524115
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX524115
Source TypeEST
Repeat Motif(AAT)4
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0175_F: GGAACCAAGTGAAGTGATATGC
Primer 2MUSB0175_R: TTCGCCCCCATATTTTCTC
Product Length314
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0175
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX524115
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX524115DX524115Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch24_Dt.08N/A94.02MUSB0175View
2Guazuncho-2 x VH8-4602, RIL (2009)AD_ch24_Dt.08N/A77.67MUSB0175View
3AD-genome wide Reference Map (2009)AD_ch08_At.08N/A12MUSB0175View
4TM-1 x 3-79, RIL (2012)AD_ch24_Dt.08N/A0MUSB0175View
5TM-1 x 3-79, RIL (2006)AD_ch08_At.08N/A83.3MUSB0175View
6TM-1 x 3-79, RIL (2014)AD_ch24_Dt.08N/A3.9MUSB0175View
7TM-1 x 3-79, RIL (2012.v3)AD_ch24_Dt.08N/A3.94MUSB0175View
8PD 94042 x (AD)4-08, F2 (2016)AD_ch24_Dt.08N/A8.1MUSB0175View
Sequence
>MUSB0175 ID=MUSB0175; Name=MUSB0175; organism=Gossypium hirsutum; type=genetic_marker; length=314bp
GGAACCAAGTGAAGTGATATGCCTTGAAAAATTGACCATGTGAACAATAA
TAATAATGAATAATTTGATTAAAGTGGTTTATACGGTGGAAAAATAAATT
ACATGGAAATAAGGACTAAATTGAAAATTGTAAAAAAATTTAAGTGTGAA
ACAATTTAATATGTGAATATGAAAATTATGACTAAAGCTTATTGAATGTG
TTATGAGATGATGAAATATGCATAAAGTATTGTAAATATGAAATTGTGGA
AAAATATGAAATTTTTATGATGACAATGACTAAATTGTTAAAATTGAGAA
AATATGGGGGCGAA