MUSB0036, MUSB0036 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0036
Genbank IDDX559554
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX559554
Source TypeEST
Repeat Motif(TA)6
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0036_F: GAATTTTGAGATGCGATTGG
Primer 2MUSB0036_R: TCACCTTACTGCTGCTGTCC
Product Length222
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0036
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX559554
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold106supercontigScaffold106:344117..344245 -
Scaffold106supercontigScaffold106:361388..361518 -
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX559554DX559554Gossypium hirsutumsequence_feature


Sequence
>MUSB0036 ID=MUSB0036; Name=MUSB0036; organism=Gossypium hirsutum; type=genetic_marker; length=222bp
GAATTTTGAGATGCGATTGGGAGTAAATTTGTCATGAGCATACTTTCGTT
ATAATAAATATGATAAATGTATATATATATAGCTGAATGTGATATCGTGT
GAAATTATATCGTTAANATCCAAGGGCTTTGGTAAAGCTAGCTATTTNAA
GGTGAAAATGCTTAATGGTTAGTATTTTGATTTTGGTAATAATCTGTNNT
TGGGACAGCAGCAGTAAGGTGA