MUCS0366, MUCS0366 (genetic_marker) Gossypium arboreum

Marker Overview
NameMUCS0366
AliasMUCS366
Genbank IDN/A
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8401
Source TypeEST
Repeat MotifATC(2)ACC(4)
PCR ConditionAnnealing temperature: 55
Primer 1MUCS366_F: CGGCACGAGCTTAGATGC
Primer 2MUCS366_R: GATCTGGTGGGTTGAAATGG
Product Length271
ContactUlloa, Mauricio
CommentPrimer data obtained in 2007-11
Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr07chromosomeMUCS0366:18..612 .
Chr07:2526362..2526956 -
Chr7chromosomeMUCS0366:18..612 .
Chr7:52918034..52918628 +
Germplasm
Stock NameType
AKA 8401accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1JLZM x ZJXSLS, F2 (2008)A_JZ_A03N/A93.5MUCS366View
Sequence
>MUCS0366 ID=MUCS0366; Name=MUCS0366; organism=Gossypium arboreum; type=genetic_marker; length=271bp
CGGCACGAGCTTAGATGCTATCATGGAAGGAGGAGGCAGTGATGATCATC
ACCACCACCACCACAGCCACCACCATCACCACCAGCAACCACTACACCAT
TATCATCATCACCACCACCGCCCTACTTTTCCATTCCAATTACTGGAGAA
GAAAGAAGAAGATAACCAACCTTGTTCCTGCTCTTCTTCCCTACCTTTCC
CTTCCCTACCGGTTTCATCTTCCTCGGCCGATCAACACACCTCGACTCGT
TCCATTTCAACCCACCAGATC