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Marker Overview
Name | MUCS0325 |
Alias | MUCS325
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8401 |
Source Type | EST |
Repeat Motif | TCA(4)TCG(2) |
PCR Condition | Annealing temperature: 55 |
Primer 1 | MUCS325_F: ACGAGCTTAAGAGCGTTTGG |
Primer 2 | MUCS325_R: TGGTCTTGTTTGCAGTGGTG |
Product Length | 268 |
Contact | Ulloa, Mauricio
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Comment | Primer data obtained in 2007-11 |
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch23_Dt.09 | N/A | 12.7 | MUCS325 | View |
2 | TM-1 x 3-79, RIL (2006) | AD_ch09_At.09 | N/A | 27 | MUCS325 | View |
3 | TM-1 x 3-79, RIL (2012) | AD_ch09_At.09 | N/A | 96.74 | MUCS325 | View |
4 | Yumian-1 x T586, F2:7 (2008) | AD_ch09_At.09 | N/A | 0 | MUCS325 | View |
5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch23_Dt.09 | N/A | 43.1 | MUCS325 | View |
6 | TM-1 x 3-79, RIL (2014) | AD_ch09_At.09 | N/A | 45.4 | MUCS325 | View |
7 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch23_Dt.09 | N/A | 87.8 | MUCS325 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 89 | mucs0325 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch09_At.09 | N/A | 105 | mucs0325 | View |
10 | Yumian-1 x T586, RIL (2006) | AD_ch15_Dt.01 | N/A | 42.5 | MUCS325a | View |
11 | Yumian-1 x T586, RIL (2006) | AD_ch23_Dt.09 | N/A | 0 | MUCS325b | View |
12 | Yumian-1 x T586, RIL (2015) | AD_ch23_Dt.09 | N/A | 22.1 | MUCS325b | View |
13 | Yumian-1 x T586, RIL (2009) | AD_ch09_At.09 | N/A | 0 | MUCS325/280y(C9) | View |
14 | Yumian-1 x T586, RIL (2009) | AD_ch15_Dt.01 | N/A | 42.5 | MUCS325/180y(C9) | View |
15 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch23_Dt.09 | N/A | 96.34 | MUCS325 | View |
16 | TM-1 x 3-79, RIL (2012.v3) | AD_ch09_At.09 | N/A | 45.42 | MUCS325 | View |
Sequence
>MUCS0325 ID=MUCS0325; Name=MUCS0325; organism=Gossypium arboreum; type=genetic_marker; length=268bp ACGAGCTTAAGAGCGTTTGGTTTTGATTTTGTTGGAAGGTTGATTGAGGA AAATAAAGATAAAAATAAAAATTTCCCTTTACATTGATTTTATGCTTCTT CATCAACCTTCTCAACAGTCCCACAACTCTCAATTTTTCTTCTTAATTTT TTTTCCCTAAAACGTTCCTACGTATATTACTTGTCCTGTTATTATTTTTG GAGCTTAAAAATCTGATCATCATCATCATCGTCGAACCACCTCATGGCCA CCACTGCAAACAAGACCA
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