JESPR0241, JESPR0241 (genetic_marker) Gossypium hirsutum

Marker Overview
NameJESPR0241
AliasJESPR241
Genbank IDAF351479
TypeSSR
SpeciesGossypium hirsutum
GermplasmTamcot Sphinx
Source SequenceAF351479.1
Source Typegenomic
Repeat Motif(GA)16
Primer 1JESPR0241_F: CTTACCCAATTGACCTATG
Primer 2JESPR0241_R: GATTCTTCTTATCATCCCC
PolymorphismP_ JESPR0241
Publication[view all]
CommentPrimer data obtained in 2002
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAF351479
Germplasm
Stock NameType
Tamcot Sphinxaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AF351479.1AF351479.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch05_At.05N/A98.4JESP241View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch05_At.05N/A64.08JESPR241View
3Guazuncho-2 x VH8-4602, RIL (2009)AD_ch05_At.05N/A55.06JESPR241View
4TM-1 x 3-79, RIL (2012)AD_ch05_At.05N/A105.25JESPR241View
5TM-1 x 3-79, RIL (2014)AD_ch05_At.05N/A93.6JESPR241View
6W10 x TM-1, F2:3 (2015)AD_ch05_At.05N/A12.7JESPR241View
7CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch05_At.05N/A155.1JESPR241View
8Monsanto SSR Bin Map, (2009)AD_ch05_At.05N/A61JESPR241View
9HS-46 x MARCABUCAG8US-1-88, RIL (2009)AD_ch05_At.05N/A8JESPR241-195View
10AD-genome wide Reference Map (2009)AD_ch05_At.05N/A154jespr0241View
11TM-1 x 3-79, RIL (2012.v3)AD_ch05_At.05N/A93.64JESPR241View
12PD 94042 x (AD)4-08, F2 (2016)AD_ch05_At.05N/A180.7JESPR241View
Sequence
>JESPR0241 ID=JESPR0241; Name=JESPR0241; organism=Gossypium hirsutum; type=genetic_marker; length=195bp
CTTACCCAATTGACCTATGTTTCTTTAAGTATGTTTGCCTTCAAATTTCT
ACNGTTNNNNAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGCCT
CNAGATTTTGCATGGGGTTTTGGTATTGAAACTAAAAAAATTAAATTAGA
ATTAAAAAAACAGTAGGTGTNNTTAAGGGGATGATAAGAAGAATC