JESPR0197, JESPR0197 (genetic_marker) Gossypium hirsutum

Marker Overview
NameJESPR0197
AliasJESPR197
Genbank IDAF351435
TypeSSR
SpeciesGossypium hirsutum
GermplasmTamcot Sphinx
Source SequenceAF351435.1
Source Typegenomic
Repeat Motif(TAC)11
Primer 1JESPR0197_F: CAATACCTGGAACATAGACAAATG
Primer 2JESPR0197_R: CTTGAGGCTTGCAAAAAATG
PolymorphismP_ JESPR0197
Publication[view all]
CommentPrimer data obtained in 2002
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAF351435
Germplasm
Stock NameType
Tamcot Sphinxaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AF351435.1AF351435.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch05_At.05N/A151.96JESPR197View
2Yumian-1 x T586, F2:7 (2008)AD_ch05_At.05N/A48.9JESPR197View
3TM-1 x 3-79, RIL (2012)AD_ch05_At.05N/A89.47JESPR197View
4Yumian-1 x T586, F2:3 (2005)AD_ch05_At.05N/A28.4JESPR197View
5Yumian-1 x T586, RIL (2006)AD_ch05_At.05N/A62JESPR197View
6Yumian-1 x T586, F2:3 (2005.v0)AD_ch05_At.05N/A28.4JESPR197View
7Yumian-1 x T586, RIL (2015)AD_ch05_At.05N/A76.9JESPR197View
8Yumian-1 x 7235, RIL (2015)AD_ch05_At.05N/A74.6JESPR197View
9TM-1 x 3-79, RIL (2014)AD_ch05_At.05N/A113JESPR197View
10W10 x TM-1, F2:3 (2015)AD_ch05_At.05N/A43.9JESPR197View
11CCRI-35 x Yumian-1, RIL (2015)AD_ch21_Dt.11N/A150.4JESPR197View
12Monsanto SSR Bin Map, (2009)AD_ch05_At.05N/A101JESPR197View
13AD-genome wide Reference Map (2009)AD_ch05_At.05N/A165jespr0197View
14TM-1 x Hai-7124, BC1 (2007)AD_ch05_At.05N/A110.4JESPR197-205View
15TM-1 x Hai-7124, BC1 (2008)AD_ch05_At.05N/A97.82JESPR197-205View
16TM-1 x Hai-7124, BC1 (2012)AD_ch05_At.05N/A106.1JESPR197-205View
17Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch05_At.05N/A20JESPR197-105View
18Yumian-1 x T586, RIL (2009)AD_ch05_At.05N/A62JESPR197/85y(C5)View
19CCRI-35 x Yumian-1, RIL (2017)AD_ch05_At.05N/A141.89JESPR197View
20TM-1 x 3-79, RIL (2012.v3)AD_ch05_At.05N/A112.99JESPR197View
21MGG-293-793, MAGIC (2018)AD_ch02_At.02N/A146.4JESPR197View
22MGG-293-793, MAGIC (2018)AD_ch05_At.05N/A146.4JESPR197View
Sequence
>JESPR0197 ID=JESPR0197; Name=JESPR0197; organism=Gossypium hirsutum; type=genetic_marker; length=93bp
CAATACCTGGAACATAGACAAATGTAAGTAAATACTACTACTACTACTAC
TACTACTACTACTACAAACCGTGCATTTTTTGCAAGCCTCAAG