JESPR0070, JESPR0070 (genetic_marker) Gossypium hirsutum

Marker Overview


Name	JESPR0070
Alias	JESPR070
Genbank ID	AF351309
Type	SSR
Species	Gossypium hirsutum
Germplasm	Tamcot Sphinx
Source Sequence	AF351309.1
Source Type	genomic
Repeat Motif	(GA)17
Primer 1	JESPR0070_F: CTGGACTAAAAGGAAGATGAGAG
Primer 2	JESPR0070_R: GAATACAGGTTCAAAGTTGATA
Polymorphism	P_ JESPR0070
Publication	[view all]
Comment	Primer data obtained in 2002

Cross References

External references for this genetic_marker


Database	Accession
DB:genbank	AF351309

Publications


Year	Publication
2001	Reddy O, Pepper A, Abdurakhmonov I, Saha S, Jenkins J, Brooks T, Bolek Y, El-Zik K. New dinucleotide and trinucleotide microsatellite marker resources for cotton genome research. Journal of cotton science. 2001; 5(2):103-113

Germplasm


Stock Name	Type
Tamcot Sphinx	accession

Relationships

The following sequence_feature feature(s) derives from this genetic_marker:


Feature Name	Unique Name	Species	Type
AF351309.1	AF351309.1	Gossypium hirsutum	sequence_feature

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	7235 x TM-1, RIL (2007)	AD_ch25_Dt.06	N/A	0	JESPR70	View
2	Emian-22 x 3-79, BC1 (2011)	AD_ch24_Dt.08	N/A	83.34	JESPR70	View
3	Yumian-1 x T586, F2:3 (2005)	AD_ch10_At.10	N/A	0	JESPR70	View
4	Yumian-1 x T586, F2:3 (2005.v0)	AD_ch10_At.10	N/A	0	JESPR70	View
5	7235 x TM-1, F2:3 (2005)	AD_ch25_Dt.06	N/A	0	JESPR70	View
6	Guazuncho-2 x VH8-4602, consensus (2009)	AD_ch24_Dt.08	N/A	35.98	JESPR070	View
7	Guazuncho-2 x VH8-4602, RIL (2009)	AD_ch24_Dt.08	N/A	24.86	JESPR070	View
8	TM-1 x 3-79, RIL (2012)	AD_ch24_Dt.08	N/A	79.27	JESPR070	View
9	Yumian-1 x T586, RIL (2006)	AD_ch24_Dt.08	N/A	55	JESPR070	View
10	(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)	AD_ch24_Dt.08	N/A	78	JESPR070	View
11	Yumian-1 x T586, RIL (2015)	AD_ch24_Dt.08	N/A	177.6	JESPR070	View
12	Yumian-1 x 7235, RIL (2015)	AD_ch24_Dt.08	N/A	5.5	JESPR070	View
13	TM-1 x 3-79, RIL (2014)	AD_ch24_Dt.08	N/A	85.1	JESPR070	View
14	CCRI-35 x Yumian-1, RIL (2015)	AD_ch24_Dt.08	N/A	41.4	JESPR070	View
15	Monsanto SSR Bin Map, (2009)	AD_ch24_Dt.08	N/A	21	JESPR070	View
16	AD-genome wide Reference Map (2009)	AD_ch25_Dt.06	N/A	1	jespr0070	View
17	AD-genome wide Reference Map (2009)	AD_ch24_Dt.08	N/A	140	jespr0070	View
18	AD-genome wide Reference Map (2009)	AD_ch24_Dt.08	N/A	180	jespr0070.	View
19	TM-1 x Hai-7124, BC1 (2008)	AD_ch24_Dt.08	N/A	60.01	JESPR70-80	View
20	TM-1 x Hai-7124, BC1 (2007)	AD_ch24_Dt.08	N/A	46.9	JESPR70-80	View
21	TM-1 x Hai-7124, BC1 (2012)	AD_ch24_Dt.08	N/A	106.2	JESPR70-80	View
22	Yumian-1 x T586, RIL (2009)	AD_ch24_Dt.08	N/A	73.6	JESPR070/90y	View
23	CCRI-35 x Yumian-1, RIL (2017)	AD_ch24_Dt.08	N/A	89.43	JESPR070	View
24	TM-1 x 3-79, RIL (2012.v3)	AD_ch24_Dt.08	N/A	85.32	JESPR070	View

Sequence

>JESPR0070 ID=JESPR0070; Name=JESPR0070; organism=Gossypium hirsutum; type=genetic_marker; length=92bp
CTGGACTAAAAGGAAGATGAGAGCTTCCATGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGATTACCCTATCAACTTTGAACCTGTATTC

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JESPR0070, JESPR0070 (genetic_marker) Gossypium hirsutum