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Marker Overview
Name | HAU1001 |
Alias | TA23806_3635
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Genbank ID | N/A |
Type | SSR |
Species | Gossypium spp. |
Source Type | EST |
Repeat Motif | (CAGCTT)6 |
PCR Condition | Annealing temperature: 56.9 |
Primer 1 | HAU1001_F: ACAGGATGTGCATGTTATGG |
Primer 2 | HAU1001_R: ATCTCTTGATTTGGGGTCAA |
Product Length | 292 |
Publication | [view all] |
Comment | Primer data obtained in 2012 |
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch15_Dt.01 | N/A | 43.65 | HAU1001 | View |
2 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch01_At.01 | N/A | 7.5 | HAU1001 | View |
3 | Yumian-1 x T586, RIL (2015) | AD_ch01_At.01 | N/A | 31.7 | HAU1001 | View |
4 | Yumian-1 x 7235, RIL (2015) | AD_ch01_At.01 | N/A | 72.4 | HAU1001 | View |
5 | DH962 X Ji Mian 5, F2 (2015) | AD_ch01_At.01 | N/A | 53.64 | HAU1001 | View |
6 | DH962 X Ji Mian 5, F2 (2015) | AD_ch15_Dt.01 | N/A | 53.64 | HAU1001 | View |
7 | GX1135 x GX100-2, RIL (2016) | AD_ch01_At.01 | N/A | 9.4 | HAU1001 | View |
8 | DH962 x Ji Mian 5, RIL (2015) | AD_ch01_At.01 | N/A | 68.1 | HAU1001 | View |
9 | DH962 x Ji Mian 5, RIL (2015) | AD_ch15_Dt.01 | N/A | 68.1 | HAU1001 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 128.2 | HAU1001 | View |
11 | 0-153 x sGK9708, RIL (2016) | AD_ch01_At.01 | N/A | 2.1 | HAU1001a | View |
12 | 0-153 x sGK9708, RIL (2016) | AD_ch01_At.01 | N/A | 5.2 | HAU1001b | View |
13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch15_Dt.01 | N/A | 92.9 | HAU1001-280 | View |
Sequence
>HAU1001 ID=HAU1001; Name=HAU1001; organism=Gossypium spp.; type=genetic_marker; length=292bp ACAGGATGTGCATGTTATGGCAGATACATTGTCAGGGCTATTTGAAGAAA AATGGGCAGCTATAGAGTCTGAGTCTAACCTTAATAGGAGGTTCGAAAGG AGTCATGATTACAATTTGCCAACTCCCACTTCAAGGAGAATTCCAGCTTC AGCTCCAGCTCCAGCTCCAGCTTCAGCACCAATTCAATCTCATGGCCCTC CTGCTTTAGCTCATTCATCACTACCATTAGAAGCTAGGACTCTTGAGAGG TCAGAATCCATGACAATGCCTGTTGACCCCAAATCAAGAGAT
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