Gh075, Gh075 (genetic_marker) Gossypium hirsutum

Marker Overview
NameGh075
AliasGh75
Genbank IDDQ908017
TypeSSR
SpeciesGossypium hirsutum
GermplasmTamcot Sphinx
Source SequenceDQ908017
Source Typegenomic
Repeat MotifAGA(19)
Primer 1Gh075_F: CGTCTGGATTGAACAGTGATC
Primer 2Gh075_R: CAACTTGATCTAACTATTGCATACG
Publication[view all]
CommentPrimer data obtained in 2008-01 from Hoffman, Steve M.
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDQ908017
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A01chromosomeA01:3326553..3326698 -
CM018202.1chromosomeCM018202.1:2353013..2353128 -
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:2334752..2334882 -
A01chromosomeA01:2087160..2087305 -
Ghir_A01chromosomeGhir_A01:2605019..2605164 -
A01chromosomeA01:2519012..2519157 -
A01chromosomeA01:2641477..2641622 -
A01chromosomeA01:2593385..2593529 -
scaffold33018supercontigscaffold33018:46997..47112 +
Gbar_A01chromosomeGbar_A01:2324381..2324496 -
A01chromosomeA01:2327129..2327244 -
CM017610.1chromosomeCM017610.1:2849533..2849663 -
CM017688.1chromosomeCM017688.1:2443591..2443712 -
A01chromosomeA01:2638905..2639050 -
Chr01chromosomeChr01:2370277..2370407 -
Chr01chromosomeChr01:2267814..2267944 -
Chr02chromosomeGh075:1..531 .
Chr02:2146417..2146905 -
Chr8chromosomeGh075:1..531 .
Chr8:62163604..62164092 +
Germplasm
Stock NameType
Tamcot Sphinxaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DQ908017DQ908017Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch01_At.01N/A83.23Gh075View
2TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A3.98Gh075View
3TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A140.4Gh075View
4CCRI-35 x Yumian-1, RIL (2015)AD_ch21_Dt.11N/A2.5Gh075View
5TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch01_At.01N/A114.8Gh75View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch01_At.01N/A138.9Gh75View
7CCRI-35 x Yumian-1, RIL (2017)AD_ch01_At.01N/A9.02Gh075View
8TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A140.4GH075View
9TM-1 x Hai-7124, BC1 (2012)AD_ch01_At.01N/A107.4Gh75-120View
Sequence
>Gh075 ID=Gh075; Name=Gh075; organism=Gossypium hirsutum; type=genetic_marker; length=146bp
CGTCTGGATTGAACAGTGATCTATATAGCAGAACTGTCAAAACCGATCTT
TATAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAATGAAAACGTATGCAATAGTTAGATCAAGTTG