DPL0887, DPL0887 (genetic_marker) Gossypium hirsutum

Marker Overview
NameDPL0887
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDelta Opal
Source SequenceDPL0887_orig
Source Typegenomic
Repeat Motif(GA)16
PCR ConditionAnnealing temperature: 55
Primer 1DPL0887_F: TCAACACTGTGGGATGAAGC
Primer 2DPL0887_R: GTGTGCCGGTCCTTGTATCT
PolymorphismP_ DPL0887
ContactFang, David D.
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Fang, David D.
Description:Molecular markers, fiber development
First name:David
Last name:Fang
Title:Supervisory Research Geneticist
Institution:USDA-ARS-SRRC-CFBRU
Address:1100 Robert E. Lee Blvd, New Orleans, LA 70124
Country:United States
Email:david.fang@usda.gov
Phone:504 286 4527
Fax:001662686-5218
Keywords:Structural Genomics
Last update:2-Jul-2009
Germplasm
Stock NameType
Delta Opalaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0887_origDPL0887_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A53.81DPL0887aView
2TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A90.6DPL0887aView
3TM-1 x 3-79, RIL (2012)AD_ch15_Dt.01N/A54.69DPL0887bView
4TM-1 x 3-79, RIL (2014)AD_ch15_Dt.01N/A65.2DPL0887bView
5(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch01_At.01N/A33.8MON_DPL0887View
6Yumian-1 x 7235, RIL (2015)AD_ch01_At.01N/A55.8DPL0887View
7CCRI-35 x Yumian-1, RIL (2015)AD_ch01_At.01N/A139.4DPL0887View
8CCRI-35 x Yumian-1, RIL (2017)AD_ch01_At.01N/A22.22DPL0887View
9TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A90.56DPL0887aView
10TM-1 x 3-79, RIL (2012.v3)AD_ch15_Dt.01N/A65.21DPL0887bView
11PD 94042 x (AD)4-08, F2 (2016)AD_ch01_At.01N/A62.8DPL0887bView
12PD 94042 x (AD)4-08, F2 (2016)AD_ch15_Dt.01N/A29.2DPL0887aView
Sequence
>DPL0887 ID=DPL0887; Name=DPL0887; organism=Gossypium hirsutum; type=genetic_marker; length=153bp
TCAACACTGTGGGATGAAGCATACAAGGAATGATTGTAGGAATATGGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAATAAACGGAAATGAATTTCTTT
TGAAGAAGAAAGATTAAGAGATAAGAAGATTCTAGATACAAGGACCGGCA
CAC