DPL0513, DPL0513 (genetic_marker) Gossypium hirsutum

Marker Overview
NameDPL0513
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDelta Opal
Source SequenceDPL0513_orig
Source Typegenomic
Repeat Motif(GTAT)21
PCR ConditionAnnealing temperature: 55
Primer 1DPL0513_F: AGACCCGGCTACTACATGTTATCTT
Primer 2DPL0513_R: ACATACAGATGCTTCACACAAACAC
PolymorphismP_ DPL0513
ContactFang, David D.
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Fang, David D.
Description:Molecular markers, fiber development
First name:David
Last name:Fang
Title:Supervisory Research Geneticist
Institution:USDA-ARS-SRRC-CFBRU
Address:1100 Robert E. Lee Blvd, New Orleans, LA 70124
Country:United States
Email:david.fang@usda.gov
Phone:504 286 4527
Fax:001662686-5218
Keywords:Structural Genomics
Last update:2-Jul-2009
Germplasm
Stock NameType
Delta Opalaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DPL0513_origDPL0513_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch01_At.01N/A28.36DPL0513View
2AD-genome wide Reference Map (2009)AD_ch01_At.01N/A90DPL0513View
3TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A56.92DPL0513View
4Yumian-1 x T586, RIL (2006)AD_ch01_At.01N/A18.3DPL0513View
5Yumian-1 x T586, RIL (2015)AD_ch01_At.01N/A43.5DPL0513View
6Yumian-1 x 7235, RIL (2015)AD_ch01_At.01N/A39.5DPL0513View
7TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A87.5DPL0513View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch01_At.01N/A100.3DPL0513View
9Yumian-1 x T586, RIL (2009)AD_ch01_At.01N/A21.8DPL0513/200yView
10TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A87.45DPL0513View
Sequence
>DPL0513 ID=DPL0513; Name=DPL0513; organism=Gossypium hirsutum; type=genetic_marker; length=202bp
AGACCCGGCTACTACATGTTATCTTATAATGATTCCTTGTATGGTTGATG
TCTATATAGATAAAAAATATAATCTTGAGGAGTTGCAGTATGTATGTATG
TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTA
TGTATGTATGTATGTATGTATGTTTATGTGTTTGTGTGAAGCATCTGTAT
GT